Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Khdc4Q3TCX3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Khdc4Q3TCX3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Khdc4Q3TCX3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Khdc4Q3TCX3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Khdc4Q3TCX3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Khdc4Q3TCX3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Khdc4Q3TCX3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Khdc4Q3TCX3 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.61■□□□□ 0.09
Khdc4Q3TCX3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.61■□□□□ 0.09
Khdc4Q3TCX3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.61■□□□□ 0.09
Khdc4Q3TCX3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Khdc4Q3TCX3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Khdc4Q3TCX3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Khdc4Q3TCX3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Khdc4Q3TCX3 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Khdc4Q3TCX3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Khdc4Q3TCX3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Khdc4Q3TCX3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Khdc4Q3TCX3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Khdc4Q3TCX3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.6■□□□□ 0.09
Khdc4Q3TCX3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Khdc4Q3TCX3 Gm27357-201ENSMUST00000183754 135 ntBASIC15.6■□□□□ 0.09
Khdc4Q3TCX3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Khdc4Q3TCX3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Khdc4Q3TCX3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Khdc4Q3TCX3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Khdc4Q3TCX3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Khdc4Q3TCX3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Khdc4Q3TCX3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Khdc4Q3TCX3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Khdc4Q3TCX3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Khdc4Q3TCX3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Khdc4Q3TCX3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Khdc4Q3TCX3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Khdc4Q3TCX3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.59■□□□□ 0.09
Khdc4Q3TCX3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Khdc4Q3TCX3 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Khdc4Q3TCX3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Khdc4Q3TCX3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Khdc4Q3TCX3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Khdc4Q3TCX3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
Khdc4Q3TCX3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Khdc4Q3TCX3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Khdc4Q3TCX3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Khdc4Q3TCX3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Khdc4Q3TCX3 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
Khdc4Q3TCX3 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Khdc4Q3TCX3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.59■□□□□ 0.09
Khdc4Q3TCX3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.59■□□□□ 0.09
Khdc4Q3TCX3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.59■□□□□ 0.09
Khdc4Q3TCX3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Khdc4Q3TCX3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Khdc4Q3TCX3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Khdc4Q3TCX3 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Khdc4Q3TCX3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Khdc4Q3TCX3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Khdc4Q3TCX3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.59■□□□□ 0.09
Khdc4Q3TCX3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Khdc4Q3TCX3 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Khdc4Q3TCX3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Khdc4Q3TCX3 Olfr129-201ENSMUST00000122318 993 ntBASIC15.58■□□□□ 0.08
Khdc4Q3TCX3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Khdc4Q3TCX3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.58■□□□□ 0.08
Khdc4Q3TCX3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.58■□□□□ 0.08
Khdc4Q3TCX3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Khdc4Q3TCX3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Khdc4Q3TCX3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Khdc4Q3TCX3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Khdc4Q3TCX3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Khdc4Q3TCX3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Khdc4Q3TCX3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Khdc4Q3TCX3 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.58■□□□□ 0.08
Khdc4Q3TCX3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Khdc4Q3TCX3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Khdc4Q3TCX3 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Khdc4Q3TCX3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Khdc4Q3TCX3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Khdc4Q3TCX3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Khdc4Q3TCX3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Khdc4Q3TCX3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Khdc4Q3TCX3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.58■□□□□ 0.08
Khdc4Q3TCX3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Khdc4Q3TCX3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Khdc4Q3TCX3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Khdc4Q3TCX3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.57■□□□□ 0.08
Khdc4Q3TCX3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.57■□□□□ 0.08
Khdc4Q3TCX3 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Khdc4Q3TCX3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Khdc4Q3TCX3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Khdc4Q3TCX3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Khdc4Q3TCX3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Khdc4Q3TCX3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Khdc4Q3TCX3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.57■□□□□ 0.08
Khdc4Q3TCX3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Khdc4Q3TCX3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Khdc4Q3TCX3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Khdc4Q3TCX3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Khdc4Q3TCX3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Khdc4Q3TCX3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms