Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chrna5Q2MKA5 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chrna5Q2MKA5 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chrna5Q2MKA5 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chrna5Q2MKA5 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chrna5Q2MKA5 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chrna5Q2MKA5 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chrna5Q2MKA5 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chrna5Q2MKA5 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Chrna5Q2MKA5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Chrna5Q2MKA5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Chrna5Q2MKA5 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.46■□□□□ 0.71
Chrna5Q2MKA5 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC19.46■□□□□ 0.71
Chrna5Q2MKA5 Gm5682-201ENSMUST00000173402 505 ntBASIC19.46■□□□□ 0.71
Chrna5Q2MKA5 Gm27646-201ENSMUST00000183989 110 ntBASIC19.46■□□□□ 0.71
Chrna5Q2MKA5 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.46■□□□□ 0.71
Chrna5Q2MKA5 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chrna5Q2MKA5 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC19.46■□□□□ 0.71
Chrna5Q2MKA5 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Chrna5Q2MKA5 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Chrna5Q2MKA5 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chrna5Q2MKA5 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chrna5Q2MKA5 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna5Q2MKA5 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna5Q2MKA5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna5Q2MKA5 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna5Q2MKA5 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna5Q2MKA5 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna5Q2MKA5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Chrna5Q2MKA5 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Chrna5Q2MKA5 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Chrna5Q2MKA5 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC19.45■□□□□ 0.7
Chrna5Q2MKA5 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC19.45■□□□□ 0.7
Chrna5Q2MKA5 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna5Q2MKA5 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna5Q2MKA5 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna5Q2MKA5 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna5Q2MKA5 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna5Q2MKA5 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Chrna5Q2MKA5 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chrna5Q2MKA5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna5Q2MKA5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.44■□□□□ 0.7
Chrna5Q2MKA5 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna5Q2MKA5 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna5Q2MKA5 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Chrna5Q2MKA5 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna5Q2MKA5 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Chrna5Q2MKA5 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna5Q2MKA5 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna5Q2MKA5 Gm4913-201ENSMUST00000117075 1290 ntBASIC19.44■□□□□ 0.7
Chrna5Q2MKA5 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.44■□□□□ 0.7
Chrna5Q2MKA5 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC19.44■□□□□ 0.7
Chrna5Q2MKA5 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna5Q2MKA5 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna5Q2MKA5 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC19.44■□□□□ 0.7
Chrna5Q2MKA5 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
Chrna5Q2MKA5 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Chrna5Q2MKA5 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna5Q2MKA5 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna5Q2MKA5 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC19.44■□□□□ 0.7
Chrna5Q2MKA5 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna5Q2MKA5 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna5Q2MKA5 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna5Q2MKA5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna5Q2MKA5 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chrna5Q2MKA5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chrna5Q2MKA5 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chrna5Q2MKA5 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chrna5Q2MKA5 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chrna5Q2MKA5 Gm8969-201ENSMUST00000199694 526 ntBASIC19.43■□□□□ 0.7
Chrna5Q2MKA5 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.43■□□□□ 0.7
Chrna5Q2MKA5 AC174742.1-201ENSMUST00000218272 304 ntBASIC19.43■□□□□ 0.7
Chrna5Q2MKA5 Ndufaf2-202ENSMUST00000223734 556 ntBASIC19.43■□□□□ 0.7
Chrna5Q2MKA5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Chrna5Q2MKA5 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chrna5Q2MKA5 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC19.43■□□□□ 0.7
Chrna5Q2MKA5 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chrna5Q2MKA5 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chrna5Q2MKA5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chrna5Q2MKA5 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chrna5Q2MKA5 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chrna5Q2MKA5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chrna5Q2MKA5 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chrna5Q2MKA5 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.42■□□□□ 0.7
Chrna5Q2MKA5 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC19.42■□□□□ 0.7
Chrna5Q2MKA5 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Chrna5Q2MKA5 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chrna5Q2MKA5 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chrna5Q2MKA5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chrna5Q2MKA5 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC19.42■□□□□ 0.7
Chrna5Q2MKA5 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chrna5Q2MKA5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chrna5Q2MKA5 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chrna5Q2MKA5 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.42■□□□□ 0.7
Chrna5Q2MKA5 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chrna5Q2MKA5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Chrna5Q2MKA5 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chrna5Q2MKA5 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chrna5Q2MKA5 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chrna5Q2MKA5 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms