Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tff1Q08423 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Tff1Q08423 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tff1Q08423 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tff1Q08423 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tff1Q08423 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tff1Q08423 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tff1Q08423 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.68□□□□□ -0.22
Tff1Q08423 Gm27741-201ENSMUST00000185060 237 ntBASIC13.68□□□□□ -0.22
Tff1Q08423 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.68□□□□□ -0.22
Tff1Q08423 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.68□□□□□ -0.22
Tff1Q08423 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tff1Q08423 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tff1Q08423 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tff1Q08423 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Tff1Q08423 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Tff1Q08423 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Tff1Q08423 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.68□□□□□ -0.22
Tff1Q08423 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Tff1Q08423 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tff1Q08423 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tff1Q08423 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tff1Q08423 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tff1Q08423 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.67□□□□□ -0.22
Tff1Q08423 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.67□□□□□ -0.22
Tff1Q08423 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tff1Q08423 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Tff1Q08423 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tff1Q08423 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tff1Q08423 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tff1Q08423 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Tff1Q08423 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tff1Q08423 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tff1Q08423 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tff1Q08423 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Tff1Q08423 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Tff1Q08423 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tff1Q08423 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tff1Q08423 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.67□□□□□ -0.22
Tff1Q08423 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tff1Q08423 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tff1Q08423 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tff1Q08423 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tff1Q08423 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tff1Q08423 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tff1Q08423 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tff1Q08423 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tff1Q08423 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tff1Q08423 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tff1Q08423 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tff1Q08423 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tff1Q08423 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tff1Q08423 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tff1Q08423 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tff1Q08423 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tff1Q08423 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tff1Q08423 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tff1Q08423 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Tff1Q08423 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tff1Q08423 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Tff1Q08423 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Tff1Q08423 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tff1Q08423 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tff1Q08423 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Tff1Q08423 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tff1Q08423 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tff1Q08423 Timm23-208ENSMUST00000226683 750 ntBASIC13.66□□□□□ -0.22
Tff1Q08423 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tff1Q08423 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Tff1Q08423 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tff1Q08423 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Tff1Q08423 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Tff1Q08423 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tff1Q08423 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.66□□□□□ -0.22
Tff1Q08423 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tff1Q08423 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Tff1Q08423 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tff1Q08423 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tff1Q08423 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tff1Q08423 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tff1Q08423 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.66□□□□□ -0.22
Tff1Q08423 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tff1Q08423 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tff1Q08423 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tff1Q08423 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tff1Q08423 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tff1Q08423 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tff1Q08423 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Tff1Q08423 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tff1Q08423 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tff1Q08423 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tff1Q08423 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Tff1Q08423 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tff1Q08423 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Tff1Q08423 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tff1Q08423 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tff1Q08423 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tff1Q08423 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Tff1Q08423 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Tff1Q08423 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms