Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.91■□□□□ 0.3
Trim43bP86448 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trim43bP86448 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43bP86448 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trim43bP86448 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43bP86448 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim43bP86448 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.91■□□□□ 0.3
Trim43bP86448 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43bP86448 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43bP86448 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trim43bP86448 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trim43bP86448 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43bP86448 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43bP86448 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43bP86448 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43bP86448 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43bP86448 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.9■□□□□ 0.3
Trim43bP86448 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim43bP86448 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43bP86448 Gm12085-201ENSMUST00000119263 940 ntBASIC16.9■□□□□ 0.3
Trim43bP86448 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43bP86448 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43bP86448 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43bP86448 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43bP86448 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43bP86448 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43bP86448 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43bP86448 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim43bP86448 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43bP86448 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Trim43bP86448 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.9■□□□□ 0.3
Trim43bP86448 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trim43bP86448 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43bP86448 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim43bP86448 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Trim43bP86448 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim43bP86448 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43bP86448 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43bP86448 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43bP86448 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43bP86448 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim43bP86448 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trim43bP86448 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.89■□□□□ 0.29
Trim43bP86448 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim43bP86448 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43bP86448 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43bP86448 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trim43bP86448 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43bP86448 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43bP86448 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43bP86448 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43bP86448 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43bP86448 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43bP86448 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43bP86448 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim43bP86448 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43bP86448 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43bP86448 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Trim43bP86448 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim43bP86448 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43bP86448 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43bP86448 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.88■□□□□ 0.29
Trim43bP86448 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43bP86448 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43bP86448 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43bP86448 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43bP86448 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43bP86448 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43bP86448 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43bP86448 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43bP86448 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43bP86448 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.88■□□□□ 0.29
Trim43bP86448 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trim43bP86448 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim43bP86448 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43bP86448 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Trim43bP86448 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43bP86448 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43bP86448 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43bP86448 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43bP86448 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43bP86448 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43bP86448 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43bP86448 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trim43bP86448 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim43bP86448 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trim43bP86448 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43bP86448 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43bP86448 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43bP86448 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43bP86448 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43bP86448 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.87■□□□□ 0.29
Trim43bP86448 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trim43bP86448 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43bP86448 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43bP86448 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim43bP86448 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.87■□□□□ 0.29
Trim43bP86448 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.87■□□□□ 0.29
Trim43bP86448 Gm10231-201ENSMUST00000181584 441 ntBASIC16.87■□□□□ 0.29
Trim43bP86448 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms