Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm6P62313 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Lsm6P62313 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm6P62313 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm6P62313 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Lsm6P62313 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm6P62313 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm6P62313 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Lsm6P62313 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm6P62313 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm6P62313 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm6P62313 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm6P62313 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm6P62313 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm6P62313 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm6P62313 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm6P62313 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm6P62313 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm6P62313 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm6P62313 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Lsm6P62313 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm6P62313 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm6P62313 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm6P62313 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm6P62313 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm6P62313 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm6P62313 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm6P62313 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm6P62313 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm6P62313 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm6P62313 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm6P62313 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm6P62313 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm6P62313 Dancr-204ENSMUST00000132389 2347 ntBASIC14.38□□□□□ -0.11
Lsm6P62313 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm6P62313 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm6P62313 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm6P62313 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm6P62313 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm6P62313 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm6P62313 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm6P62313 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm6P62313 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm6P62313 Gm22697-201ENSMUST00000175194 63 ntBASIC14.38□□□□□ -0.11
Lsm6P62313 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.38□□□□□ -0.11
Lsm6P62313 Gm18101-201ENSMUST00000215769 548 ntBASIC14.38□□□□□ -0.11
Lsm6P62313 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.38□□□□□ -0.11
Lsm6P62313 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.38□□□□□ -0.11
Lsm6P62313 Gm21559-201ENSMUST00000220638 855 ntBASIC14.38□□□□□ -0.11
Lsm6P62313 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm6P62313 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm6P62313 Gm8587-201ENSMUST00000076538 843 ntBASIC14.38□□□□□ -0.11
Lsm6P62313 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm6P62313 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm6P62313 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm6P62313 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm6P62313 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm6P62313 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Lsm6P62313 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm6P62313 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Lsm6P62313 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm6P62313 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm6P62313 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm6P62313 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lsm6P62313 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Lsm6P62313 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm6P62313 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm6P62313 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.37□□□□□ -0.11
Lsm6P62313 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm6P62313 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm6P62313 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm6P62313 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm6P62313 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm6P62313 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm6P62313 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Lsm6P62313 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Lsm6P62313 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Lsm6P62313 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.37□□□□□ -0.11
Lsm6P62313 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.37□□□□□ -0.11
Lsm6P62313 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.37□□□□□ -0.11
Lsm6P62313 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm6P62313 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm6P62313 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm6P62313 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Lsm6P62313 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm6P62313 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm6P62313 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm6P62313 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm6P62313 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm6P62313 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm6P62313 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm6P62313 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lsm6P62313 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Lsm6P62313 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
Lsm6P62313 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm6P62313 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm6P62313 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm6P62313 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm6P62313 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Lsm6P62313 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms