Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab4aP56371 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab4aP56371 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab4aP56371 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab4aP56371 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rab4aP56371 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Rab4aP56371 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Rab4aP56371 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab4aP56371 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rab4aP56371 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab4aP56371 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rab4aP56371 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab4aP56371 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab4aP56371 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rab4aP56371 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rab4aP56371 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab4aP56371 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab4aP56371 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab4aP56371 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rab4aP56371 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rab4aP56371 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab4aP56371 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rab4aP56371 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC13□□□□□ -0.33
Rab4aP56371 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rab4aP56371 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rab4aP56371 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab4aP56371 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab4aP56371 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rab4aP56371 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13□□□□□ -0.33
Rab4aP56371 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rab4aP56371 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Rab4aP56371 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rab4aP56371 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC12.99□□□□□ -0.33
Rab4aP56371 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC12.99□□□□□ -0.33
Rab4aP56371 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Rab4aP56371 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Rab4aP56371 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rab4aP56371 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rab4aP56371 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab4aP56371 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab4aP56371 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab4aP56371 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab4aP56371 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab4aP56371 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.98□□□□□ -0.33
Rab4aP56371 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC12.98□□□□□ -0.33
Rab4aP56371 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab4aP56371 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.98□□□□□ -0.33
Rab4aP56371 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab4aP56371 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab4aP56371 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab4aP56371 Gm44544-201ENSMUST00000207052 1844 ntBASIC12.98□□□□□ -0.33
Rab4aP56371 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC12.98□□□□□ -0.33
Rab4aP56371 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rab4aP56371 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab4aP56371 Rps24-207ENSMUST00000224568 714 ntBASIC12.98□□□□□ -0.33
Rab4aP56371 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Rab4aP56371 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab4aP56371 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab4aP56371 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.98□□□□□ -0.33
Rab4aP56371 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rab4aP56371 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab4aP56371 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab4aP56371 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab4aP56371 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab4aP56371 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab4aP56371 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rab4aP56371 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rab4aP56371 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Rab4aP56371 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC12.97□□□□□ -0.33
Rab4aP56371 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab4aP56371 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rab4aP56371 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms