Protein–RNA interactions for Protein: P54761

Ephb4, Ephrin type-B receptor 4, mousemouse

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ephb4P54761 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.2■□□□□ 0.5
Ephb4P54761 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.2■□□□□ 0.5
Ephb4P54761 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
Ephb4P54761 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ephb4P54761 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ephb4P54761 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ephb4P54761 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ephb4P54761 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ephb4P54761 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ephb4P54761 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ephb4P54761 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ephb4P54761 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ephb4P54761 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ephb4P54761 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ephb4P54761 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ephb4P54761 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.2■□□□□ 0.5
Ephb4P54761 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ephb4P54761 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ephb4P54761 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ephb4P54761 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ephb4P54761 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ephb4P54761 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ephb4P54761 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ephb4P54761 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ephb4P54761 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ephb4P54761 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ephb4P54761 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ephb4P54761 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.19■□□□□ 0.5
Ephb4P54761 Gm12350-201ENSMUST00000121208 462 ntBASIC18.19■□□□□ 0.5
Ephb4P54761 Gm5364-201ENSMUST00000216789 889 ntBASIC18.19■□□□□ 0.5
Ephb4P54761 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ephb4P54761 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ephb4P54761 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ephb4P54761 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ephb4P54761 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Ephb4P54761 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.19■□□□□ 0.5
Ephb4P54761 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.19■□□□□ 0.5
Ephb4P54761 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ephb4P54761 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ephb4P54761 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ephb4P54761 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ephb4P54761 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ephb4P54761 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.18■□□□□ 0.5
Ephb4P54761 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ephb4P54761 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ephb4P54761 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ephb4P54761 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ephb4P54761 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.18■□□□□ 0.5
Ephb4P54761 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ephb4P54761 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Ephb4P54761 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.18■□□□□ 0.5
Ephb4P54761 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.18■□□□□ 0.5
Ephb4P54761 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.18■□□□□ 0.5
Ephb4P54761 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ephb4P54761 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ephb4P54761 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ephb4P54761 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.18■□□□□ 0.5
Ephb4P54761 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ephb4P54761 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.18■□□□□ 0.5
Ephb4P54761 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Ephb4P54761 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ephb4P54761 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ephb4P54761 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ephb4P54761 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ephb4P54761 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ephb4P54761 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ephb4P54761 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ephb4P54761 Phf7-203ENSMUST00000226565 1971 ntBASIC18.17■□□□□ 0.5
Ephb4P54761 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ephb4P54761 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ephb4P54761 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ephb4P54761 Gm11779-201ENSMUST00000118541 368 ntBASIC18.17■□□□□ 0.5
Ephb4P54761 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.17■□□□□ 0.5
Ephb4P54761 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.17■□□□□ 0.5
Ephb4P54761 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ephb4P54761 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ephb4P54761 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ephb4P54761 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ephb4P54761 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ephb4P54761 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Ephb4P54761 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ephb4P54761 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ephb4P54761 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ephb4P54761 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ephb4P54761 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.16■□□□□ 0.5
Ephb4P54761 Gm13186-201ENSMUST00000118031 316 ntBASIC18.16■□□□□ 0.5
Ephb4P54761 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.16■□□□□ 0.5
Ephb4P54761 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.16■□□□□ 0.5
Ephb4P54761 Gm2213-201ENSMUST00000197485 688 ntBASIC18.16■□□□□ 0.5
Ephb4P54761 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ephb4P54761 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ephb4P54761 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ephb4P54761 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ephb4P54761 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ephb4P54761 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ephb4P54761 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ephb4P54761 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ephb4P54761 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ephb4P54761 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ephb4P54761 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms