Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sdc2P43407 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sdc2P43407 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Sdc2P43407 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Sdc2P43407 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sdc2P43407 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sdc2P43407 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sdc2P43407 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Sdc2P43407 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sdc2P43407 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sdc2P43407 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sdc2P43407 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Sdc2P43407 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sdc2P43407 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.42■□□□□ 0.54
Sdc2P43407 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sdc2P43407 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sdc2P43407 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Sdc2P43407 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sdc2P43407 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.42■□□□□ 0.54
Sdc2P43407 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sdc2P43407 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sdc2P43407 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sdc2P43407 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sdc2P43407 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.42■□□□□ 0.54
Sdc2P43407 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Sdc2P43407 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sdc2P43407 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sdc2P43407 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sdc2P43407 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Sdc2P43407 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sdc2P43407 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sdc2P43407 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sdc2P43407 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sdc2P43407 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sdc2P43407 Gm5417-201ENSMUST00000079706 384 ntBASIC18.41■□□□□ 0.54
Sdc2P43407 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sdc2P43407 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Sdc2P43407 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sdc2P43407 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sdc2P43407 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Sdc2P43407 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sdc2P43407 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.4■□□□□ 0.54
Sdc2P43407 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sdc2P43407 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sdc2P43407 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sdc2P43407 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sdc2P43407 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Sdc2P43407 Gm11539-201ENSMUST00000119837 557 ntBASIC18.4■□□□□ 0.54
Sdc2P43407 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.4■□□□□ 0.54
Sdc2P43407 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sdc2P43407 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sdc2P43407 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.4■□□□□ 0.54
Sdc2P43407 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Sdc2P43407 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sdc2P43407 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sdc2P43407 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Sdc2P43407 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sdc2P43407 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sdc2P43407 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.4■□□□□ 0.54
Sdc2P43407 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sdc2P43407 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sdc2P43407 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sdc2P43407 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sdc2P43407 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sdc2P43407 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Sdc2P43407 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc2P43407 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc2P43407 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc2P43407 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc2P43407 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.39■□□□□ 0.53
Sdc2P43407 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc2P43407 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc2P43407 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.39■□□□□ 0.53
Sdc2P43407 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
Sdc2P43407 Gm7370-201ENSMUST00000219471 767 ntBASIC18.39■□□□□ 0.53
Sdc2P43407 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc2P43407 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.39■□□□□ 0.53
Sdc2P43407 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc2P43407 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.39■□□□□ 0.53
Sdc2P43407 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc2P43407 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc2P43407 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Sdc2P43407 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc2P43407 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.39■□□□□ 0.53
Sdc2P43407 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc2P43407 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc2P43407 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc2P43407 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc2P43407 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc2P43407 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc2P43407 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc2P43407 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Sdc2P43407 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sdc2P43407 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sdc2P43407 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Sdc2P43407 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sdc2P43407 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sdc2P43407 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sdc2P43407 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sdc2P43407 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms