Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.93■□□□□ 0.3
Msh2P43247 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Msh2P43247 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.93■□□□□ 0.3
Msh2P43247 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh2P43247 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh2P43247 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.93■□□□□ 0.3
Msh2P43247 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh2P43247 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh2P43247 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Msh2P43247 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Msh2P43247 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh2P43247 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh2P43247 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Msh2P43247 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Msh2P43247 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.92■□□□□ 0.3
Msh2P43247 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh2P43247 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh2P43247 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Msh2P43247 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Msh2P43247 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.92■□□□□ 0.3
Msh2P43247 Gm27463-201ENSMUST00000183569 57 ntBASIC16.92■□□□□ 0.3
Msh2P43247 Gm9731-201ENSMUST00000209480 747 ntBASIC16.92■□□□□ 0.3
Msh2P43247 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.92■□□□□ 0.3
Msh2P43247 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Msh2P43247 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.92■□□□□ 0.3
Msh2P43247 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh2P43247 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Msh2P43247 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Msh2P43247 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Msh2P43247 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.92■□□□□ 0.3
Msh2P43247 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Msh2P43247 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh2P43247 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.92■□□□□ 0.3
Msh2P43247 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Msh2P43247 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh2P43247 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh2P43247 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Msh2P43247 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh2P43247 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh2P43247 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Msh2P43247 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh2P43247 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh2P43247 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Msh2P43247 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Msh2P43247 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Msh2P43247 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Msh2P43247 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Msh2P43247 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.91■□□□□ 0.3
Msh2P43247 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.91■□□□□ 0.3
Msh2P43247 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh2P43247 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh2P43247 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh2P43247 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh2P43247 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh2P43247 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh2P43247 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.91■□□□□ 0.3
Msh2P43247 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh2P43247 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh2P43247 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Msh2P43247 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Msh2P43247 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh2P43247 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Msh2P43247 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh2P43247 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh2P43247 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh2P43247 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh2P43247 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Msh2P43247 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh2P43247 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh2P43247 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh2P43247 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh2P43247 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh2P43247 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.9■□□□□ 0.3
Msh2P43247 Gm11539-201ENSMUST00000119837 557 ntBASIC16.9■□□□□ 0.3
Msh2P43247 Gm13436-201ENSMUST00000120418 567 ntBASIC16.9■□□□□ 0.3
Msh2P43247 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.9■□□□□ 0.3
Msh2P43247 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Msh2P43247 Gm17661-201ENSMUST00000170317 270 ntBASIC16.9■□□□□ 0.3
Msh2P43247 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.9■□□□□ 0.3
Msh2P43247 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Msh2P43247 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh2P43247 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.9■□□□□ 0.3
Msh2P43247 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh2P43247 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh2P43247 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Msh2P43247 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Msh2P43247 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Msh2P43247 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Msh2P43247 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh2P43247 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh2P43247 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh2P43247 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh2P43247 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh2P43247 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh2P43247 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh2P43247 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Msh2P43247 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Msh2P43247 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.89■□□□□ 0.29
Msh2P43247 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.89■□□□□ 0.29
Msh2P43247 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms