Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Fen1P39749 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Fen1P39749 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Fen1P39749 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Fen1P39749 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Fen1P39749 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Fen1P39749 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Fen1P39749 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Fen1P39749 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Fen1P39749 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Fen1P39749 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.57■□□□□ 0.24
Fen1P39749 Gm12382-201ENSMUST00000122005 922 ntBASIC16.57■□□□□ 0.24
Fen1P39749 Gm10517-202ENSMUST00000192970 758 ntBASIC16.57■□□□□ 0.24
Fen1P39749 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Fen1P39749 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Fen1P39749 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Fen1P39749 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.57■□□□□ 0.24
Fen1P39749 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Fen1P39749 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Fen1P39749 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Fen1P39749 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Fen1P39749 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Fen1P39749 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Fen1P39749 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Fen1P39749 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Fen1P39749 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Fen1P39749 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Fen1P39749 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Fen1P39749 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Fen1P39749 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Fen1P39749 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Fen1P39749 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.56■□□□□ 0.24
Fen1P39749 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.56■□□□□ 0.24
Fen1P39749 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.56■□□□□ 0.24
Fen1P39749 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Fen1P39749 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Fen1P39749 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Fen1P39749 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Fen1P39749 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Fen1P39749 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Fen1P39749 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Fen1P39749 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Fen1P39749 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Fen1P39749 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Fen1P39749 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.55■□□□□ 0.24
Fen1P39749 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Fen1P39749 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Fen1P39749 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.55■□□□□ 0.24
Fen1P39749 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Fen1P39749 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Fen1P39749 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Fen1P39749 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Fen1P39749 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Fen1P39749 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Fen1P39749 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Fen1P39749 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Fen1P39749 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.55■□□□□ 0.24
Fen1P39749 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Fen1P39749 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Fen1P39749 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.55■□□□□ 0.24
Fen1P39749 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Fen1P39749 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Fen1P39749 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Fen1P39749 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Fen1P39749 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Fen1P39749 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Fen1P39749 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Fen1P39749 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Fen1P39749 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Fen1P39749 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Fen1P39749 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Fen1P39749 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Fen1P39749 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Fen1P39749 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Fen1P39749 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Fen1P39749 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Fen1P39749 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Fen1P39749 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.54■□□□□ 0.24
Fen1P39749 Trmt13-210ENSMUST00000198454 880 ntBASIC16.54■□□□□ 0.24
Fen1P39749 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.54■□□□□ 0.24
Fen1P39749 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Fen1P39749 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Fen1P39749 Gm10812-201ENSMUST00000099864 546 ntBASIC16.54■□□□□ 0.24
Fen1P39749 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Fen1P39749 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Fen1P39749 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Fen1P39749 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Fen1P39749 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Fen1P39749 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.54■□□□□ 0.24
Fen1P39749 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Fen1P39749 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.54■□□□□ 0.24
Fen1P39749 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Fen1P39749 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Fen1P39749 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Fen1P39749 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Fen1P39749 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Fen1P39749 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Fen1P39749 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Fen1P39749 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.53■□□□□ 0.24
Fen1P39749 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms