Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.94■□□□□ 0.46
Sox5P35710 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sox5P35710 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.94■□□□□ 0.46
Sox5P35710 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Sox5P35710 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox5P35710 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox5P35710 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox5P35710 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.94■□□□□ 0.46
Sox5P35710 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox5P35710 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox5P35710 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox5P35710 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox5P35710 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Sox5P35710 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sox5P35710 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox5P35710 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox5P35710 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Sox5P35710 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox5P35710 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox5P35710 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.93■□□□□ 0.46
Sox5P35710 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox5P35710 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox5P35710 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox5P35710 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Sox5P35710 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Sox5P35710 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox5P35710 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox5P35710 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.93■□□□□ 0.46
Sox5P35710 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sox5P35710 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sox5P35710 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.93■□□□□ 0.46
Sox5P35710 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox5P35710 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.93■□□□□ 0.46
Sox5P35710 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Sox5P35710 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox5P35710 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Sox5P35710 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox5P35710 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox5P35710 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Sox5P35710 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Sox5P35710 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sox5P35710 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sox5P35710 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox5P35710 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox5P35710 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox5P35710 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox5P35710 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox5P35710 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox5P35710 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sox5P35710 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.92■□□□□ 0.46
Sox5P35710 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.92■□□□□ 0.46
Sox5P35710 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox5P35710 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sox5P35710 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox5P35710 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox5P35710 Gm715-201ENSMUST00000117865 831 ntBASIC17.92■□□□□ 0.46
Sox5P35710 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
Sox5P35710 Gm13168-201ENSMUST00000121771 632 ntBASIC17.92■□□□□ 0.46
Sox5P35710 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox5P35710 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Sox5P35710 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.92■□□□□ 0.46
Sox5P35710 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.92■□□□□ 0.46
Sox5P35710 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox5P35710 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Sox5P35710 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox5P35710 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox5P35710 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox5P35710 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sox5P35710 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox5P35710 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox5P35710 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox5P35710 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox5P35710 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox5P35710 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox5P35710 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox5P35710 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox5P35710 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox5P35710 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Sox5P35710 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox5P35710 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.91■□□□□ 0.46
Sox5P35710 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox5P35710 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox5P35710 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox5P35710 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sox5P35710 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.9■□□□□ 0.46
Sox5P35710 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox5P35710 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox5P35710 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox5P35710 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sox5P35710 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.9■□□□□ 0.46
Sox5P35710 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox5P35710 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox5P35710 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox5P35710 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox5P35710 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox5P35710 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox5P35710 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox5P35710 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox5P35710 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox5P35710 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.89■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms