Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thbs1P35441 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thbs1P35441 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Thbs1P35441 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.17■□□□□ 0.02
Thbs1P35441 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thbs1P35441 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thbs1P35441 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Thbs1P35441 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Thbs1P35441 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thbs1P35441 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Thbs1P35441 Gm11336-201ENSMUST00000118168 334 ntBASIC15.17■□□□□ 0.02
Thbs1P35441 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Thbs1P35441 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.17■□□□□ 0.02
Thbs1P35441 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.17■□□□□ 0.02
Thbs1P35441 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thbs1P35441 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.17■□□□□ 0.02
Thbs1P35441 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Thbs1P35441 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thbs1P35441 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thbs1P35441 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Thbs1P35441 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Thbs1P35441 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thbs1P35441 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thbs1P35441 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Thbs1P35441 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Thbs1P35441 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thbs1P35441 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thbs1P35441 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Thbs1P35441 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Thbs1P35441 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thbs1P35441 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thbs1P35441 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thbs1P35441 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thbs1P35441 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Thbs1P35441 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thbs1P35441 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thbs1P35441 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thbs1P35441 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Thbs1P35441 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thbs1P35441 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.16■□□□□ 0.02
Thbs1P35441 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thbs1P35441 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.16■□□□□ 0.02
Thbs1P35441 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Thbs1P35441 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Thbs1P35441 Gm7889-201ENSMUST00000185591 958 ntBASIC15.16■□□□□ 0.02
Thbs1P35441 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC15.16■□□□□ 0.02
Thbs1P35441 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Thbs1P35441 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.16■□□□□ 0.02
Thbs1P35441 Gm18959-201ENSMUST00000208954 655 ntBASIC15.16■□□□□ 0.02
Thbs1P35441 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thbs1P35441 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Thbs1P35441 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.16■□□□□ 0.02
Thbs1P35441 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thbs1P35441 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thbs1P35441 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Thbs1P35441 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thbs1P35441 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thbs1P35441 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Thbs1P35441 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Thbs1P35441 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Thbs1P35441 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Thbs1P35441 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thbs1P35441 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Thbs1P35441 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Thbs1P35441 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thbs1P35441 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thbs1P35441 Gm26039-201ENSMUST00000158152 144 ntBASIC15.15■□□□□ 0.02
Thbs1P35441 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thbs1P35441 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Thbs1P35441 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.15■□□□□ 0.02
Thbs1P35441 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thbs1P35441 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thbs1P35441 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thbs1P35441 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thbs1P35441 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thbs1P35441 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thbs1P35441 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.15■□□□□ 0.02
Thbs1P35441 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thbs1P35441 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Thbs1P35441 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thbs1P35441 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thbs1P35441 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thbs1P35441 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thbs1P35441 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Thbs1P35441 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.15■□□□□ 0.02
Thbs1P35441 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Thbs1P35441 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.14■□□□□ 0.01
Thbs1P35441 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Thbs1P35441 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Thbs1P35441 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Thbs1P35441 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Thbs1P35441 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Thbs1P35441 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Thbs1P35441 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Thbs1P35441 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Thbs1P35441 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Thbs1P35441 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.14■□□□□ 0.01
Thbs1P35441 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.14■□□□□ 0.01
Thbs1P35441 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Thbs1P35441 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms