Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BdnfP21237 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.73■□□□□ 0.11
BdnfP21237 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BdnfP21237 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BdnfP21237 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
BdnfP21237 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BdnfP21237 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BdnfP21237 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BdnfP21237 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BdnfP21237 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
BdnfP21237 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
BdnfP21237 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BdnfP21237 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BdnfP21237 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BdnfP21237 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BdnfP21237 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BdnfP21237 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BdnfP21237 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
BdnfP21237 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
BdnfP21237 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BdnfP21237 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
BdnfP21237 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BdnfP21237 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
BdnfP21237 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
BdnfP21237 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.72■□□□□ 0.11
BdnfP21237 Gm27011-201ENSMUST00000182352 972 ntBASIC15.72■□□□□ 0.11
BdnfP21237 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.72■□□□□ 0.11
BdnfP21237 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.72■□□□□ 0.11
BdnfP21237 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.72■□□□□ 0.11
BdnfP21237 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.72■□□□□ 0.11
BdnfP21237 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.72■□□□□ 0.11
BdnfP21237 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BdnfP21237 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
BdnfP21237 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.72■□□□□ 0.11
BdnfP21237 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BdnfP21237 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BdnfP21237 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
BdnfP21237 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BdnfP21237 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BdnfP21237 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BdnfP21237 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BdnfP21237 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BdnfP21237 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
BdnfP21237 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BdnfP21237 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BdnfP21237 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BdnfP21237 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BdnfP21237 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BdnfP21237 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BdnfP21237 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BdnfP21237 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BdnfP21237 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BdnfP21237 Gm715-201ENSMUST00000117865 831 ntBASIC15.71■□□□□ 0.11
BdnfP21237 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.71■□□□□ 0.11
BdnfP21237 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.71■□□□□ 0.11
BdnfP21237 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.71■□□□□ 0.11
BdnfP21237 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
BdnfP21237 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.71■□□□□ 0.11
BdnfP21237 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.71■□□□□ 0.11
BdnfP21237 Timm23-208ENSMUST00000226683 750 ntBASIC15.71■□□□□ 0.11
BdnfP21237 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BdnfP21237 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
BdnfP21237 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.71■□□□□ 0.11
BdnfP21237 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
BdnfP21237 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BdnfP21237 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
BdnfP21237 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BdnfP21237 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.71■□□□□ 0.11
BdnfP21237 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BdnfP21237 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BdnfP21237 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
BdnfP21237 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
BdnfP21237 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
BdnfP21237 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BdnfP21237 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BdnfP21237 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.7■□□□□ 0.1
BdnfP21237 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
BdnfP21237 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BdnfP21237 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BdnfP21237 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
BdnfP21237 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BdnfP21237 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BdnfP21237 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BdnfP21237 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
BdnfP21237 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
BdnfP21237 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BdnfP21237 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.7■□□□□ 0.1
BdnfP21237 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BdnfP21237 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BdnfP21237 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BdnfP21237 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BdnfP21237 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BdnfP21237 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BdnfP21237 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BdnfP21237 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BdnfP21237 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BdnfP21237 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
BdnfP21237 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BdnfP21237 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BdnfP21237 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms