Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UbbP0CG49 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UbbP0CG49 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.3□□□□□ -0.12
UbbP0CG49 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.3□□□□□ -0.12
UbbP0CG49 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UbbP0CG49 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UbbP0CG49 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UbbP0CG49 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UbbP0CG49 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UbbP0CG49 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UbbP0CG49 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
UbbP0CG49 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UbbP0CG49 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UbbP0CG49 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UbbP0CG49 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UbbP0CG49 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UbbP0CG49 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UbbP0CG49 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UbbP0CG49 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.3□□□□□ -0.12
UbbP0CG49 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.29□□□□□ -0.12
UbbP0CG49 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
UbbP0CG49 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UbbP0CG49 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UbbP0CG49 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
UbbP0CG49 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.29□□□□□ -0.12
UbbP0CG49 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UbbP0CG49 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UbbP0CG49 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
UbbP0CG49 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
UbbP0CG49 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UbbP0CG49 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UbbP0CG49 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UbbP0CG49 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
UbbP0CG49 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.29□□□□□ -0.12
UbbP0CG49 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.29□□□□□ -0.12
UbbP0CG49 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UbbP0CG49 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.29□□□□□ -0.12
UbbP0CG49 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UbbP0CG49 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.28□□□□□ -0.12
UbbP0CG49 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UbbP0CG49 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UbbP0CG49 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.28□□□□□ -0.12
UbbP0CG49 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UbbP0CG49 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.28□□□□□ -0.12
UbbP0CG49 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UbbP0CG49 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UbbP0CG49 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UbbP0CG49 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UbbP0CG49 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UbbP0CG49 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UbbP0CG49 Il3ra-202ENSMUST00000223589 738 ntBASIC14.28□□□□□ -0.12
UbbP0CG49 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UbbP0CG49 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UbbP0CG49 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UbbP0CG49 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
UbbP0CG49 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UbbP0CG49 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
UbbP0CG49 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UbbP0CG49 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UbbP0CG49 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
UbbP0CG49 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UbbP0CG49 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UbbP0CG49 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
UbbP0CG49 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
UbbP0CG49 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UbbP0CG49 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UbbP0CG49 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UbbP0CG49 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
UbbP0CG49 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UbbP0CG49 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
UbbP0CG49 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
UbbP0CG49 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
UbbP0CG49 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
UbbP0CG49 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UbbP0CG49 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
UbbP0CG49 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
UbbP0CG49 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.27□□□□□ -0.12
UbbP0CG49 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UbbP0CG49 Gm12441-201ENSMUST00000121806 588 ntBASIC14.27□□□□□ -0.13
UbbP0CG49 Gm15378-201ENSMUST00000121894 207 ntBASIC14.27□□□□□ -0.13
UbbP0CG49 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.27□□□□□ -0.13
UbbP0CG49 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
UbbP0CG49 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
UbbP0CG49 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UbbP0CG49 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UbbP0CG49 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UbbP0CG49 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
UbbP0CG49 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UbbP0CG49 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.26□□□□□ -0.13
UbbP0CG49 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UbbP0CG49 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UbbP0CG49 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.26□□□□□ -0.13
UbbP0CG49 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.26□□□□□ -0.13
UbbP0CG49 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.26□□□□□ -0.13
UbbP0CG49 Gm18958-201ENSMUST00000174258 762 ntBASIC14.26□□□□□ -0.13
UbbP0CG49 Trmt13-210ENSMUST00000198454 880 ntBASIC14.26□□□□□ -0.13
UbbP0CG49 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UbbP0CG49 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.26□□□□□ -0.13
UbbP0CG49 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UbbP0CG49 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms