Protein–RNA interactions for Protein: P05213

Tuba1b, Tubulin alpha-1B chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tuba1bP05213 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tuba1bP05213 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tuba1bP05213 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tuba1bP05213 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tuba1bP05213 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Tuba1bP05213 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tuba1bP05213 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tuba1bP05213 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tuba1bP05213 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Tuba1bP05213 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.27■□□□□ 0.04
Tuba1bP05213 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Tuba1bP05213 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tuba1bP05213 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tuba1bP05213 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tuba1bP05213 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tuba1bP05213 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tuba1bP05213 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.27■□□□□ 0.04
Tuba1bP05213 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tuba1bP05213 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.27■□□□□ 0.04
Tuba1bP05213 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Tuba1bP05213 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.27■□□□□ 0.03
Tuba1bP05213 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tuba1bP05213 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tuba1bP05213 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tuba1bP05213 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Tuba1bP05213 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tuba1bP05213 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tuba1bP05213 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Tuba1bP05213 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.26■□□□□ 0.03
Tuba1bP05213 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Tuba1bP05213 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.26■□□□□ 0.03
Tuba1bP05213 Gm11643-201ENSMUST00000119578 864 ntBASIC15.26■□□□□ 0.03
Tuba1bP05213 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.26■□□□□ 0.03
Tuba1bP05213 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Gm10517-202ENSMUST00000192970 758 ntBASIC15.26■□□□□ 0.03
Tuba1bP05213 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.26■□□□□ 0.03
Tuba1bP05213 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Tuba1bP05213 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Tuba1bP05213 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tuba1bP05213 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Tuba1bP05213 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Tuba1bP05213 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.25■□□□□ 0.03
Tuba1bP05213 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tuba1bP05213 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tuba1bP05213 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tuba1bP05213 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tuba1bP05213 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tuba1bP05213 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Tuba1bP05213 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tuba1bP05213 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tuba1bP05213 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.25■□□□□ 0.03
Tuba1bP05213 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Tuba1bP05213 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tuba1bP05213 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tuba1bP05213 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tuba1bP05213 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tuba1bP05213 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tuba1bP05213 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tuba1bP05213 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Tuba1bP05213 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Tuba1bP05213 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tuba1bP05213 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tuba1bP05213 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tuba1bP05213 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Tuba1bP05213 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Tuba1bP05213 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tuba1bP05213 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tuba1bP05213 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tuba1bP05213 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tuba1bP05213 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Tuba1bP05213 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tuba1bP05213 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms