Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
P01878 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
P01878 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
P01878 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
P01878 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
P01878 Gm13036-201ENSMUST00000117799 748 ntBASIC16.84■□□□□ 0.29
P01878 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
P01878 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
P01878 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
P01878 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
P01878 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
P01878 Gm27628-201ENSMUST00000184911 107 ntBASIC16.84■□□□□ 0.29
P01878 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.84■□□□□ 0.29
P01878 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.84■□□□□ 0.29
P01878 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
P01878 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
P01878 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
P01878 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
P01878 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
P01878 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
P01878 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
P01878 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.84■□□□□ 0.29
P01878 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
P01878 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
P01878 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
P01878 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.83■□□□□ 0.28
P01878 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01878 Gm11594-201ENSMUST00000122313 162 ntBASIC16.83■□□□□ 0.28
P01878 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.83■□□□□ 0.28
P01878 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.83■□□□□ 0.28
P01878 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.83■□□□□ 0.28
P01878 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.83■□□□□ 0.28
P01878 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01878 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01878 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01878 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01878 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01878 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
P01878 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01878 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01878 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.83■□□□□ 0.28
P01878 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
P01878 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01878 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
P01878 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.82■□□□□ 0.28
P01878 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01878 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
P01878 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01878 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01878 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01878 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.82■□□□□ 0.28
P01878 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
P01878 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01878 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.82■□□□□ 0.28
P01878 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
P01878 Gm5264-201ENSMUST00000190584 848 ntBASIC16.82■□□□□ 0.28
P01878 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
P01878 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.82■□□□□ 0.28
P01878 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.82■□□□□ 0.28
P01878 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01878 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
P01878 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01878 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
P01878 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01878 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.81■□□□□ 0.28
P01878 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01878 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01878 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01878 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.81■□□□□ 0.28
P01878 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
P01878 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.81■□□□□ 0.28
P01878 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.81■□□□□ 0.28
P01878 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
P01878 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01878 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01878 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01878 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
P01878 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01878 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01878 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01878 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
P01878 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01878 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
P01878 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01878 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01878 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01878 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
P01878 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
P01878 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.8■□□□□ 0.28
P01878 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01878 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01878 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.8■□□□□ 0.28
P01878 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.8■□□□□ 0.28
P01878 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.8■□□□□ 0.28
P01878 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.8■□□□□ 0.28
P01878 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01878 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01878 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01878 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01878 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms