Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hcn1O88704 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.74■□□□□ 0.11
Hcn1O88704 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.74■□□□□ 0.11
Hcn1O88704 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hcn1O88704 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hcn1O88704 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hcn1O88704 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hcn1O88704 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hcn1O88704 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Hcn1O88704 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hcn1O88704 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hcn1O88704 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hcn1O88704 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hcn1O88704 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hcn1O88704 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hcn1O88704 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.74■□□□□ 0.11
Hcn1O88704 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hcn1O88704 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hcn1O88704 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hcn1O88704 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hcn1O88704 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hcn1O88704 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.73■□□□□ 0.11
Hcn1O88704 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hcn1O88704 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.73■□□□□ 0.11
Hcn1O88704 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Hcn1O88704 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hcn1O88704 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Hcn1O88704 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hcn1O88704 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hcn1O88704 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hcn1O88704 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hcn1O88704 Gm13474-201ENSMUST00000122466 815 ntBASIC15.73■□□□□ 0.11
Hcn1O88704 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hcn1O88704 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.73■□□□□ 0.11
Hcn1O88704 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.73■□□□□ 0.11
Hcn1O88704 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Hcn1O88704 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hcn1O88704 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Hcn1O88704 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.73■□□□□ 0.11
Hcn1O88704 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hcn1O88704 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hcn1O88704 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hcn1O88704 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hcn1O88704 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Hcn1O88704 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hcn1O88704 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hcn1O88704 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hcn1O88704 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hcn1O88704 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hcn1O88704 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hcn1O88704 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hcn1O88704 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Hcn1O88704 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.72■□□□□ 0.11
Hcn1O88704 Gm7977-201ENSMUST00000193787 748 ntBASIC15.72■□□□□ 0.11
Hcn1O88704 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hcn1O88704 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.72■□□□□ 0.11
Hcn1O88704 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hcn1O88704 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hcn1O88704 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Hcn1O88704 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hcn1O88704 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hcn1O88704 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Hcn1O88704 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Hcn1O88704 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hcn1O88704 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hcn1O88704 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hcn1O88704 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hcn1O88704 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hcn1O88704 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hcn1O88704 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hcn1O88704 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hcn1O88704 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hcn1O88704 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.71■□□□□ 0.11
Hcn1O88704 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hcn1O88704 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hcn1O88704 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Hcn1O88704 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Hcn1O88704 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hcn1O88704 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Hcn1O88704 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Hcn1O88704 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hcn1O88704 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.71■□□□□ 0.1
Hcn1O88704 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hcn1O88704 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Hcn1O88704 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.71■□□□□ 0.1
Hcn1O88704 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn1O88704 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn1O88704 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn1O88704 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn1O88704 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn1O88704 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.7■□□□□ 0.1
Hcn1O88704 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Hcn1O88704 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Hcn1O88704 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn1O88704 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hcn1O88704 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Hcn1O88704 Gm18032-201ENSMUST00000222541 538 ntBASIC15.7■□□□□ 0.1
Hcn1O88704 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Hcn1O88704 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.7■□□□□ 0.1
Hcn1O88704 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms