Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Tnfrsf17O88472 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Tnfrsf17O88472 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.22■□□□□ 0.03
Tnfrsf17O88472 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.22■□□□□ 0.03
Tnfrsf17O88472 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.22■□□□□ 0.03
Tnfrsf17O88472 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.22■□□□□ 0.03
Tnfrsf17O88472 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf17O88472 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf17O88472 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.22■□□□□ 0.03
Tnfrsf17O88472 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf17O88472 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf17O88472 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Tnfrsf17O88472 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf17O88472 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf17O88472 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf17O88472 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf17O88472 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf17O88472 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf17O88472 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf17O88472 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf17O88472 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.21■□□□□ 0.03
Tnfrsf17O88472 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.21■□□□□ 0.03
Tnfrsf17O88472 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.21■□□□□ 0.03
Tnfrsf17O88472 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.21■□□□□ 0.03
Tnfrsf17O88472 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf17O88472 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Tnfrsf17O88472 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf17O88472 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf17O88472 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Tnfrsf17O88472 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Tnfrsf17O88472 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf17O88472 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Tnfrsf17O88472 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.21■□□□□ 0.02
Tnfrsf17O88472 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tnfrsf17O88472 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tnfrsf17O88472 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tnfrsf17O88472 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf17O88472 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf17O88472 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf17O88472 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf17O88472 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf17O88472 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf17O88472 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf17O88472 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf17O88472 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf17O88472 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf17O88472 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf17O88472 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf17O88472 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Tnfrsf17O88472 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf17O88472 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf17O88472 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf17O88472 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf17O88472 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf17O88472 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf17O88472 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf17O88472 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf17O88472 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf17O88472 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf17O88472 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.19■□□□□ 0.02
Tnfrsf17O88472 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf17O88472 Fst-202ENSMUST00000223640 2612 ntBASIC15.18■□□□□ 0.02
Tnfrsf17O88472 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.18■□□□□ 0.02
Tnfrsf17O88472 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf17O88472 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf17O88472 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Tnfrsf17O88472 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf17O88472 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Tnfrsf17O88472 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.18■□□□□ 0.02
Tnfrsf17O88472 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf17O88472 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf17O88472 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf17O88472 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf17O88472 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms