Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc4a4O88343 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc4a4O88343 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.35■□□□□ 0.69
Slc4a4O88343 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc4a4O88343 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Slc4a4O88343 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc4a4O88343 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc4a4O88343 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Slc4a4O88343 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.34■□□□□ 0.69
Slc4a4O88343 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc4a4O88343 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Slc4a4O88343 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slc4a4O88343 Gm13312-201ENSMUST00000119631 718 ntBASIC19.34■□□□□ 0.69
Slc4a4O88343 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Slc4a4O88343 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc4a4O88343 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slc4a4O88343 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc4a4O88343 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc4a4O88343 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.34■□□□□ 0.69
Slc4a4O88343 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.34■□□□□ 0.69
Slc4a4O88343 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slc4a4O88343 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc4a4O88343 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc4a4O88343 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc4a4O88343 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc4a4O88343 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slc4a4O88343 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc4a4O88343 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Slc4a4O88343 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Slc4a4O88343 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc4a4O88343 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc4a4O88343 Gm12895-201ENSMUST00000122214 226 ntBASIC19.33■□□□□ 0.68
Slc4a4O88343 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
Slc4a4O88343 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Slc4a4O88343 Gm36967-201ENSMUST00000193814 266 ntBASIC19.33■□□□□ 0.68
Slc4a4O88343 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.33■□□□□ 0.68
Slc4a4O88343 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.33■□□□□ 0.68
Slc4a4O88343 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc4a4O88343 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc4a4O88343 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Slc4a4O88343 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Slc4a4O88343 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.33■□□□□ 0.68
Slc4a4O88343 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc4a4O88343 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Slc4a4O88343 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.32■□□□□ 0.68
Slc4a4O88343 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc4a4O88343 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc4a4O88343 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Slc4a4O88343 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc4a4O88343 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Slc4a4O88343 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc4a4O88343 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc4a4O88343 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc4a4O88343 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc4a4O88343 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc4a4O88343 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.32■□□□□ 0.68
Slc4a4O88343 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc4a4O88343 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.32■□□□□ 0.68
Slc4a4O88343 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.32■□□□□ 0.68
Slc4a4O88343 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.32■□□□□ 0.68
Slc4a4O88343 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Slc4a4O88343 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc4a4O88343 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc4a4O88343 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc4a4O88343 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc4a4O88343 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc4a4O88343 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc4a4O88343 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Slc4a4O88343 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc4a4O88343 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Slc4a4O88343 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc4a4O88343 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.31■□□□□ 0.68
Slc4a4O88343 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc4a4O88343 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc4a4O88343 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.31■□□□□ 0.68
Slc4a4O88343 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Slc4a4O88343 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Slc4a4O88343 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc4a4O88343 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc4a4O88343 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Slc4a4O88343 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc4a4O88343 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc4a4O88343 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slc4a4O88343 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc4a4O88343 Gm27741-201ENSMUST00000185060 237 ntBASIC19.3■□□□□ 0.68
Slc4a4O88343 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.3■□□□□ 0.68
Slc4a4O88343 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc4a4O88343 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Slc4a4O88343 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slc4a4O88343 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slc4a4O88343 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc4a4O88343 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc4a4O88343 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc4a4O88343 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc4a4O88343 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc4a4O88343 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.29■□□□□ 0.68
Slc4a4O88343 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc4a4O88343 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Slc4a4O88343 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc4a4O88343 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms