Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.14■□□□□ 0.33
Ttc3O88196 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.14■□□□□ 0.33
Ttc3O88196 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ttc3O88196 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.14■□□□□ 0.33
Ttc3O88196 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ttc3O88196 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.14■□□□□ 0.33
Ttc3O88196 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ttc3O88196 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ttc3O88196 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ttc3O88196 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ttc3O88196 Gm25990-201ENSMUST00000102440 86 ntBASIC17.13■□□□□ 0.33
Ttc3O88196 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ttc3O88196 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ttc3O88196 Mir6404-201ENSMUST00000183699 94 ntBASIC17.13■□□□□ 0.33
Ttc3O88196 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ttc3O88196 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ttc3O88196 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ttc3O88196 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ttc3O88196 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ttc3O88196 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ttc3O88196 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.13■□□□□ 0.33
Ttc3O88196 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ttc3O88196 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.13■□□□□ 0.33
Ttc3O88196 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.13■□□□□ 0.33
Ttc3O88196 Gm7862-201ENSMUST00000121461 292 ntBASIC17.13■□□□□ 0.33
Ttc3O88196 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.13■□□□□ 0.33
Ttc3O88196 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Ttc3O88196 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ttc3O88196 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ttc3O88196 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ttc3O88196 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ttc3O88196 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Ttc3O88196 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.12■□□□□ 0.33
Ttc3O88196 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ttc3O88196 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ttc3O88196 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ttc3O88196 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ttc3O88196 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ttc3O88196 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.11■□□□□ 0.33
Ttc3O88196 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ttc3O88196 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ttc3O88196 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ttc3O88196 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
Ttc3O88196 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ttc3O88196 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ttc3O88196 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ttc3O88196 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ttc3O88196 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ttc3O88196 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ttc3O88196 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Ttc3O88196 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ttc3O88196 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.11■□□□□ 0.33
Ttc3O88196 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.11■□□□□ 0.33
Ttc3O88196 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ttc3O88196 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.11■□□□□ 0.33
Ttc3O88196 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ttc3O88196 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.11■□□□□ 0.33
Ttc3O88196 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.11■□□□□ 0.33
Ttc3O88196 Gm4535-201ENSMUST00000182274 558 ntBASIC17.11■□□□□ 0.33
Ttc3O88196 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ttc3O88196 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ttc3O88196 Gm10355-201ENSMUST00000097146 517 ntBASIC17.11■□□□□ 0.33
Ttc3O88196 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ttc3O88196 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.11■□□□□ 0.33
Ttc3O88196 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ttc3O88196 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ttc3O88196 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Ttc3O88196 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ttc3O88196 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ttc3O88196 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Ttc3O88196 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ttc3O88196 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ttc3O88196 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ttc3O88196 Gm6550-201ENSMUST00000187574 993 ntBASIC17.1■□□□□ 0.33
Ttc3O88196 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.1■□□□□ 0.33
Ttc3O88196 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.1■□□□□ 0.33
Ttc3O88196 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ttc3O88196 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ttc3O88196 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ttc3O88196 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ttc3O88196 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ttc3O88196 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ttc3O88196 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.1■□□□□ 0.33
Ttc3O88196 Gm1401-201ENSMUST00000122048 772 ntBASIC17.09■□□□□ 0.33
Ttc3O88196 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.09■□□□□ 0.33
Ttc3O88196 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.09■□□□□ 0.33
Ttc3O88196 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ttc3O88196 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ttc3O88196 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ttc3O88196 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
Ttc3O88196 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.09■□□□□ 0.33
Ttc3O88196 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ttc3O88196 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ttc3O88196 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ttc3O88196 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ttc3O88196 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ttc3O88196 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ttc3O88196 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ttc3O88196 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Ttc3O88196 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms