Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trdmt1O55055 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.04■□□□□ 0.48
Trdmt1O55055 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trdmt1O55055 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trdmt1O55055 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trdmt1O55055 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.03■□□□□ 0.48
Trdmt1O55055 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trdmt1O55055 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.03■□□□□ 0.48
Trdmt1O55055 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trdmt1O55055 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trdmt1O55055 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trdmt1O55055 Gm13036-201ENSMUST00000117799 748 ntBASIC18.03■□□□□ 0.48
Trdmt1O55055 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.03■□□□□ 0.48
Trdmt1O55055 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trdmt1O55055 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.03■□□□□ 0.48
Trdmt1O55055 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.03■□□□□ 0.48
Trdmt1O55055 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.03■□□□□ 0.48
Trdmt1O55055 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.03■□□□□ 0.48
Trdmt1O55055 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trdmt1O55055 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trdmt1O55055 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.03■□□□□ 0.48
Trdmt1O55055 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trdmt1O55055 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trdmt1O55055 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trdmt1O55055 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trdmt1O55055 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trdmt1O55055 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trdmt1O55055 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.02■□□□□ 0.48
Trdmt1O55055 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.02■□□□□ 0.48
Trdmt1O55055 Gm27628-201ENSMUST00000184911 107 ntBASIC18.02■□□□□ 0.48
Trdmt1O55055 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.02■□□□□ 0.48
Trdmt1O55055 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trdmt1O55055 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trdmt1O55055 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.02■□□□□ 0.47
Trdmt1O55055 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Trdmt1O55055 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trdmt1O55055 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trdmt1O55055 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.01■□□□□ 0.47
Trdmt1O55055 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trdmt1O55055 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trdmt1O55055 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trdmt1O55055 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trdmt1O55055 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trdmt1O55055 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trdmt1O55055 Gm14140-201ENSMUST00000119999 995 ntBASIC18.01■□□□□ 0.47
Trdmt1O55055 Gm12260-201ENSMUST00000122447 411 ntBASIC18.01■□□□□ 0.47
Trdmt1O55055 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.01■□□□□ 0.47
Trdmt1O55055 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trdmt1O55055 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trdmt1O55055 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trdmt1O55055 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trdmt1O55055 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trdmt1O55055 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trdmt1O55055 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trdmt1O55055 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trdmt1O55055 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.01■□□□□ 0.47
Trdmt1O55055 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trdmt1O55055 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trdmt1O55055 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trdmt1O55055 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trdmt1O55055 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trdmt1O55055 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trdmt1O55055 Gm3928-201ENSMUST00000121141 1307 ntBASIC18■□□□□ 0.47
Trdmt1O55055 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Trdmt1O55055 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trdmt1O55055 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trdmt1O55055 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18■□□□□ 0.47
Trdmt1O55055 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Trdmt1O55055 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Trdmt1O55055 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18■□□□□ 0.47
Trdmt1O55055 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trdmt1O55055 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trdmt1O55055 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trdmt1O55055 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Trdmt1O55055 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trdmt1O55055 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18■□□□□ 0.47
Trdmt1O55055 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Trdmt1O55055 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trdmt1O55055 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trdmt1O55055 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trdmt1O55055 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trdmt1O55055 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trdmt1O55055 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Trdmt1O55055 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trdmt1O55055 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trdmt1O55055 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trdmt1O55055 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trdmt1O55055 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
Trdmt1O55055 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trdmt1O55055 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trdmt1O55055 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trdmt1O55055 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Trdmt1O55055 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trdmt1O55055 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trdmt1O55055 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.99■□□□□ 0.47
Trdmt1O55055 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trdmt1O55055 Gm7222-201ENSMUST00000117512 906 ntBASIC17.99■□□□□ 0.47
Trdmt1O55055 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trdmt1O55055 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.99■□□□□ 0.47
Trdmt1O55055 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms