Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.49■□□□□ 0.55
Stx1aO35526 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Stx1aO35526 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Stx1aO35526 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Stx1aO35526 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stx1aO35526 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Stx1aO35526 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stx1aO35526 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Stx1aO35526 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stx1aO35526 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Stx1aO35526 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Stx1aO35526 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.49■□□□□ 0.55
Stx1aO35526 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Stx1aO35526 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Stx1aO35526 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Stx1aO35526 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Stx1aO35526 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stx1aO35526 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stx1aO35526 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stx1aO35526 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stx1aO35526 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stx1aO35526 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stx1aO35526 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stx1aO35526 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
Stx1aO35526 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Stx1aO35526 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Stx1aO35526 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stx1aO35526 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Stx1aO35526 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stx1aO35526 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stx1aO35526 Gm5643-201ENSMUST00000117081 966 ntBASIC18.48■□□□□ 0.55
Stx1aO35526 Gm10698-201ENSMUST00000182663 604 ntBASIC18.48■□□□□ 0.55
Stx1aO35526 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stx1aO35526 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Stx1aO35526 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Stx1aO35526 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Stx1aO35526 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stx1aO35526 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Stx1aO35526 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stx1aO35526 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Stx1aO35526 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stx1aO35526 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stx1aO35526 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Stx1aO35526 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stx1aO35526 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.47■□□□□ 0.55
Stx1aO35526 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.47■□□□□ 0.55
Stx1aO35526 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stx1aO35526 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stx1aO35526 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Stx1aO35526 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stx1aO35526 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stx1aO35526 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stx1aO35526 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Stx1aO35526 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stx1aO35526 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stx1aO35526 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stx1aO35526 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stx1aO35526 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.47■□□□□ 0.55
Stx1aO35526 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Stx1aO35526 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stx1aO35526 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stx1aO35526 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Stx1aO35526 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Stx1aO35526 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Stx1aO35526 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Stx1aO35526 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Stx1aO35526 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Stx1aO35526 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Stx1aO35526 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Stx1aO35526 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Stx1aO35526 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Stx1aO35526 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Stx1aO35526 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.46■□□□□ 0.55
Stx1aO35526 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.54
Stx1aO35526 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Stx1aO35526 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Stx1aO35526 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Stx1aO35526 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.45■□□□□ 0.54
Stx1aO35526 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Stx1aO35526 Gm12527-201ENSMUST00000117967 564 ntBASIC18.45■□□□□ 0.54
Stx1aO35526 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.45■□□□□ 0.54
Stx1aO35526 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.45■□□□□ 0.54
Stx1aO35526 Gm7791-201ENSMUST00000219066 539 ntBASIC18.45■□□□□ 0.54
Stx1aO35526 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Stx1aO35526 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Stx1aO35526 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Stx1aO35526 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.45■□□□□ 0.54
Stx1aO35526 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Stx1aO35526 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Stx1aO35526 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Stx1aO35526 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Stx1aO35526 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Stx1aO35526 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.45■□□□□ 0.54
Stx1aO35526 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Stx1aO35526 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Stx1aO35526 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Stx1aO35526 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Stx1aO35526 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Stx1aO35526 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.44■□□□□ 0.54
Stx1aO35526 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms