Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Tnfsf11O35235 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf11O35235 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf11O35235 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf11O35235 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf11O35235 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf11O35235 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf11O35235 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf11O35235 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf11O35235 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf11O35235 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.85□□□□□ -0.35
Tnfsf11O35235 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf11O35235 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf11O35235 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf11O35235 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf11O35235 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf11O35235 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
Tnfsf11O35235 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.85□□□□□ -0.35
Tnfsf11O35235 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf11O35235 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf11O35235 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Tnfsf11O35235 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.85□□□□□ -0.35
Tnfsf11O35235 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf11O35235 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf11O35235 Gm15375-201ENSMUST00000119510 849 ntBASIC12.85□□□□□ -0.35
Tnfsf11O35235 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.85□□□□□ -0.35
Tnfsf11O35235 Gm8495-201ENSMUST00000188740 694 ntBASIC12.85□□□□□ -0.35
Tnfsf11O35235 Gm26524-201ENSMUST00000192339 390 ntBASIC12.85□□□□□ -0.35
Tnfsf11O35235 Gm5408-201ENSMUST00000197998 747 ntBASIC12.85□□□□□ -0.35
Tnfsf11O35235 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf11O35235 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.85□□□□□ -0.35
Tnfsf11O35235 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Tnfsf11O35235 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf11O35235 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf11O35235 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf11O35235 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.85□□□□□ -0.35
Tnfsf11O35235 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf11O35235 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Tnfsf11O35235 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf11O35235 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Tnfsf11O35235 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Tnfsf11O35235 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf11O35235 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfsf11O35235 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf11O35235 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf11O35235 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf11O35235 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf11O35235 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf11O35235 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf11O35235 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC12.84□□□□□ -0.35
Tnfsf11O35235 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC12.84□□□□□ -0.35
Tnfsf11O35235 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf11O35235 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.84□□□□□ -0.35
Tnfsf11O35235 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Tnfsf11O35235 Rab3c-203ENSMUST00000224180 967 ntBASIC12.84□□□□□ -0.35
Tnfsf11O35235 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf11O35235 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf11O35235 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.84□□□□□ -0.35
Tnfsf11O35235 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.84□□□□□ -0.35
Tnfsf11O35235 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf11O35235 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.84□□□□□ -0.35
Tnfsf11O35235 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf11O35235 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf11O35235 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf11O35235 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf11O35235 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.84□□□□□ -0.35
Tnfsf11O35235 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf11O35235 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf11O35235 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfsf11O35235 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Tnfsf11O35235 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tnfsf11O35235 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tnfsf11O35235 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Tnfsf11O35235 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.83□□□□□ -0.36
Tnfsf11O35235 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Tnfsf11O35235 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Tnfsf11O35235 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf11O35235 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf11O35235 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf11O35235 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Tnfsf11O35235 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf11O35235 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Tnfsf11O35235 Mir5133-201ENSMUST00000174955 77 ntBASIC12.83□□□□□ -0.36
Tnfsf11O35235 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf11O35235 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Tnfsf11O35235 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC12.83□□□□□ -0.36
Tnfsf11O35235 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf11O35235 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf11O35235 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf11O35235 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf11O35235 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf11O35235 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Tnfsf11O35235 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Tnfsf11O35235 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.83□□□□□ -0.36
Tnfsf11O35235 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Tnfsf11O35235 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfsf11O35235 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf11O35235 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.82□□□□□ -0.36
Tnfsf11O35235 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfsf11O35235 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms