Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Casp6O08738 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Casp6O08738 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Casp6O08738 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Casp6O08738 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Casp6O08738 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Casp6O08738 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Casp6O08738 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Casp6O08738 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Casp6O08738 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Casp6O08738 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Casp6O08738 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Casp6O08738 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Casp6O08738 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Casp6O08738 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Casp6O08738 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.07□□□□□ -0.16
Casp6O08738 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Casp6O08738 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Casp6O08738 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Casp6O08738 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Casp6O08738 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Casp6O08738 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Casp6O08738 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Casp6O08738 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Casp6O08738 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Casp6O08738 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Casp6O08738 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Casp6O08738 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Casp6O08738 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Casp6O08738 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Casp6O08738 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Casp6O08738 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Casp6O08738 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Casp6O08738 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Casp6O08738 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Casp6O08738 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Casp6O08738 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.06□□□□□ -0.16
Casp6O08738 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Casp6O08738 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Casp6O08738 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Casp6O08738 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Casp6O08738 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Casp6O08738 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Casp6O08738 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.06□□□□□ -0.16
Casp6O08738 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.06□□□□□ -0.16
Casp6O08738 Mir5131-201ENSMUST00000175426 93 ntBASIC14.06□□□□□ -0.16
Casp6O08738 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.06□□□□□ -0.16
Casp6O08738 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.06□□□□□ -0.16
Casp6O08738 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.06□□□□□ -0.16
Casp6O08738 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Casp6O08738 Gm10060-201ENSMUST00000212002 111 ntBASIC14.06□□□□□ -0.16
Casp6O08738 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.06□□□□□ -0.16
Casp6O08738 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Casp6O08738 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Casp6O08738 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Casp6O08738 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.06□□□□□ -0.16
Casp6O08738 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Casp6O08738 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Casp6O08738 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Casp6O08738 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Casp6O08738 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
Casp6O08738 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Casp6O08738 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Casp6O08738 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Casp6O08738 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.05□□□□□ -0.16
Casp6O08738 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Casp6O08738 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Casp6O08738 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.05□□□□□ -0.16
Casp6O08738 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Casp6O08738 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.05□□□□□ -0.16
Casp6O08738 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Casp6O08738 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Casp6O08738 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Casp6O08738 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Casp6O08738 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.05□□□□□ -0.16
Casp6O08738 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Casp6O08738 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.05□□□□□ -0.16
Casp6O08738 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
Casp6O08738 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Casp6O08738 Gm6296-201ENSMUST00000222599 943 ntBASIC14.05□□□□□ -0.16
Casp6O08738 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.05□□□□□ -0.16
Casp6O08738 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.05□□□□□ -0.16
Casp6O08738 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.05□□□□□ -0.16
Casp6O08738 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Casp6O08738 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Casp6O08738 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Casp6O08738 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Casp6O08738 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Casp6O08738 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.05□□□□□ -0.16
Casp6O08738 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Casp6O08738 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Casp6O08738 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.05□□□□□ -0.16
Casp6O08738 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Casp6O08738 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Casp6O08738 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Casp6O08738 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Casp6O08738 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Casp6O08738 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Casp6O08738 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Casp6O08738 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms