Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp35M0QWN7 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp35M0QWN7 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp35M0QWN7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp35M0QWN7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp35M0QWN7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp35M0QWN7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp35M0QWN7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp35M0QWN7 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp35M0QWN7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp35M0QWN7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Usp35M0QWN7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp35M0QWN7 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp35M0QWN7 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp35M0QWN7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp35M0QWN7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp35M0QWN7 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Usp35M0QWN7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp35M0QWN7 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.59■□□□□ 0.41
Usp35M0QWN7 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Usp35M0QWN7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.59■□□□□ 0.41
Usp35M0QWN7 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp35M0QWN7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Usp35M0QWN7 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp35M0QWN7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp35M0QWN7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp35M0QWN7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp35M0QWN7 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Usp35M0QWN7 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp35M0QWN7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Usp35M0QWN7 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp35M0QWN7 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp35M0QWN7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
Usp35M0QWN7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp35M0QWN7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp35M0QWN7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Usp35M0QWN7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp35M0QWN7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp35M0QWN7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp35M0QWN7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.58■□□□□ 0.4
Usp35M0QWN7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Usp35M0QWN7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Usp35M0QWN7 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp35M0QWN7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.58■□□□□ 0.4
Usp35M0QWN7 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp35M0QWN7 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Usp35M0QWN7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Usp35M0QWN7 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp35M0QWN7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Usp35M0QWN7 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp35M0QWN7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp35M0QWN7 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.58■□□□□ 0.4
Usp35M0QWN7 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp35M0QWN7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp35M0QWN7 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp35M0QWN7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Usp35M0QWN7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp35M0QWN7 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Usp35M0QWN7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp35M0QWN7 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp35M0QWN7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp35M0QWN7 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp35M0QWN7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp35M0QWN7 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp35M0QWN7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp35M0QWN7 Gm7153-201ENSMUST00000117092 455 ntBASIC17.57■□□□□ 0.4
Usp35M0QWN7 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp35M0QWN7 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp35M0QWN7 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.57■□□□□ 0.4
Usp35M0QWN7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp35M0QWN7 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Usp35M0QWN7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp35M0QWN7 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp35M0QWN7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp35M0QWN7 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp35M0QWN7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp35M0QWN7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Usp35M0QWN7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp35M0QWN7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Usp35M0QWN7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp35M0QWN7 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp35M0QWN7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Usp35M0QWN7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp35M0QWN7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp35M0QWN7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp35M0QWN7 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp35M0QWN7 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Usp35M0QWN7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.56■□□□□ 0.4
Usp35M0QWN7 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp35M0QWN7 Gm27000-201ENSMUST00000182943 842 ntBASIC17.56■□□□□ 0.4
Usp35M0QWN7 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp35M0QWN7 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp35M0QWN7 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.56■□□□□ 0.4
Usp35M0QWN7 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp35M0QWN7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp35M0QWN7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp35M0QWN7 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp35M0QWN7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp35M0QWN7 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp35M0QWN7 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms