Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.46□□□□□ -0.1
Trav13d-3J3QMG8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Trav13d-3J3QMG8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Gm10013-201ENSMUST00000106074 672 ntBASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Mir7071-201ENSMUST00000184847 69 ntBASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav13d-3J3QMG8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav13d-3J3QMG8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav13d-3J3QMG8 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.44□□□□□ -0.1
Trav13d-3J3QMG8 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-3J3QMG8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-3J3QMG8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-3J3QMG8 Gm11355-201ENSMUST00000121120 306 ntBASIC14.44□□□□□ -0.1
Trav13d-3J3QMG8 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-3J3QMG8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav13d-3J3QMG8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-3J3QMG8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-3J3QMG8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-3J3QMG8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-3J3QMG8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-3J3QMG8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-3J3QMG8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-3J3QMG8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-3J3QMG8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-3J3QMG8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-3J3QMG8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13d-3J3QMG8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav13d-3J3QMG8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav13d-3J3QMG8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-3J3QMG8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav13d-3J3QMG8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-3J3QMG8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-3J3QMG8 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav13d-3J3QMG8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-3J3QMG8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-3J3QMG8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-3J3QMG8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav13d-3J3QMG8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav13d-3J3QMG8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-3J3QMG8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-3J3QMG8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-3J3QMG8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-3J3QMG8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-3J3QMG8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-3J3QMG8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.43□□□□□ -0.1
Trav13d-3J3QMG8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-3J3QMG8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-3J3QMG8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-3J3QMG8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav13d-3J3QMG8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-3J3QMG8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-3J3QMG8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav13d-3J3QMG8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13d-3J3QMG8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-3J3QMG8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-3J3QMG8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Trav13d-3J3QMG8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-3J3QMG8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-3J3QMG8 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-3J3QMG8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-3J3QMG8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-3J3QMG8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav13d-3J3QMG8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.42□□□□□ -0.1
Trav13d-3J3QMG8 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-3J3QMG8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-3J3QMG8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav13d-3J3QMG8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav13d-3J3QMG8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-3J3QMG8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms