Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.35■□□□□ 0.21
Gm3139J3QK78 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm3139J3QK78 Rprl3-201ENSMUST00000157400 290 ntBASIC16.35■□□□□ 0.21
Gm3139J3QK78 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.35■□□□□ 0.21
Gm3139J3QK78 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Gm3139J3QK78 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm3139J3QK78 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.35■□□□□ 0.21
Gm3139J3QK78 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm3139J3QK78 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Gm3139J3QK78 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm3139J3QK78 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm3139J3QK78 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Gm3139J3QK78 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Gm3139J3QK78 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
Gm3139J3QK78 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Gm3139J3QK78 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gm3139J3QK78 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.33■□□□□ 0.2
Gm3139J3QK78 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.33■□□□□ 0.2
Gm3139J3QK78 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gm3139J3QK78 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.33■□□□□ 0.2
Gm3139J3QK78 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.33■□□□□ 0.2
Gm3139J3QK78 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm3139J3QK78 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm3139J3QK78 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gm3139J3QK78 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm3139J3QK78 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm3139J3QK78 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm3139J3QK78 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm3139J3QK78 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Gm3139J3QK78 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3139J3QK78 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3139J3QK78 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3139J3QK78 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Gm3139J3QK78 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3139J3QK78 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3139J3QK78 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.32■□□□□ 0.2
Gm3139J3QK78 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3139J3QK78 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.32■□□□□ 0.2
Gm3139J3QK78 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3139J3QK78 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Gm3139J3QK78 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3139J3QK78 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3139J3QK78 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3139J3QK78 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3139J3QK78 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3139J3QK78 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm3139J3QK78 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Gm3139J3QK78 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm3139J3QK78 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.31■□□□□ 0.2
Gm3139J3QK78 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm3139J3QK78 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Gm3139J3QK78 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Gm3139J3QK78 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm3139J3QK78 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm3139J3QK78 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Gm3139J3QK78 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm3139J3QK78 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm3139J3QK78 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm3139J3QK78 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Gm3139J3QK78 Gm13216-201ENSMUST00000117145 591 ntBASIC16.31■□□□□ 0.2
Gm3139J3QK78 Gm12895-201ENSMUST00000122214 226 ntBASIC16.31■□□□□ 0.2
Gm3139J3QK78 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm3139J3QK78 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm3139J3QK78 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Gm3139J3QK78 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm3139J3QK78 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm3139J3QK78 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm3139J3QK78 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.31■□□□□ 0.2
Gm3139J3QK78 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Gm3139J3QK78 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm3139J3QK78 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gm3139J3QK78 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gm3139J3QK78 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gm3139J3QK78 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms