Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
R3hdm1E9Q9Q2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3hdm1E9Q9Q2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3hdm1E9Q9Q2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3hdm1E9Q9Q2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
R3hdm1E9Q9Q2 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
R3hdm1E9Q9Q2 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
R3hdm1E9Q9Q2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3hdm1E9Q9Q2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
R3hdm1E9Q9Q2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
R3hdm1E9Q9Q2 Gm27867-201ENSMUST00000184778 125 ntBASIC18.06■□□□□ 0.48
R3hdm1E9Q9Q2 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.06■□□□□ 0.48
R3hdm1E9Q9Q2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3hdm1E9Q9Q2 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3hdm1E9Q9Q2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3hdm1E9Q9Q2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3hdm1E9Q9Q2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3hdm1E9Q9Q2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3hdm1E9Q9Q2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3hdm1E9Q9Q2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
R3hdm1E9Q9Q2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3hdm1E9Q9Q2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
R3hdm1E9Q9Q2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
R3hdm1E9Q9Q2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
R3hdm1E9Q9Q2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
R3hdm1E9Q9Q2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
R3hdm1E9Q9Q2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.04■□□□□ 0.48
R3hdm1E9Q9Q2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
R3hdm1E9Q9Q2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
R3hdm1E9Q9Q2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.04■□□□□ 0.48
R3hdm1E9Q9Q2 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.04■□□□□ 0.48
R3hdm1E9Q9Q2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
R3hdm1E9Q9Q2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
R3hdm1E9Q9Q2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.04■□□□□ 0.48
R3hdm1E9Q9Q2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
R3hdm1E9Q9Q2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
R3hdm1E9Q9Q2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
R3hdm1E9Q9Q2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
R3hdm1E9Q9Q2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
R3hdm1E9Q9Q2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
R3hdm1E9Q9Q2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
R3hdm1E9Q9Q2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
R3hdm1E9Q9Q2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
R3hdm1E9Q9Q2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
R3hdm1E9Q9Q2 Rprl3-201ENSMUST00000157400 290 ntBASIC18.03■□□□□ 0.48
R3hdm1E9Q9Q2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.03■□□□□ 0.48
R3hdm1E9Q9Q2 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.03■□□□□ 0.48
R3hdm1E9Q9Q2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
R3hdm1E9Q9Q2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
R3hdm1E9Q9Q2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
R3hdm1E9Q9Q2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
R3hdm1E9Q9Q2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
R3hdm1E9Q9Q2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
R3hdm1E9Q9Q2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
R3hdm1E9Q9Q2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
R3hdm1E9Q9Q2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
R3hdm1E9Q9Q2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
R3hdm1E9Q9Q2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.02■□□□□ 0.48
R3hdm1E9Q9Q2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
R3hdm1E9Q9Q2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
R3hdm1E9Q9Q2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
R3hdm1E9Q9Q2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
R3hdm1E9Q9Q2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
R3hdm1E9Q9Q2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
R3hdm1E9Q9Q2 Gm15467-201ENSMUST00000120582 445 ntBASIC18.02■□□□□ 0.48
R3hdm1E9Q9Q2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.02■□□□□ 0.48
R3hdm1E9Q9Q2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
R3hdm1E9Q9Q2 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
R3hdm1E9Q9Q2 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.02■□□□□ 0.48
R3hdm1E9Q9Q2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
R3hdm1E9Q9Q2 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
R3hdm1E9Q9Q2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
R3hdm1E9Q9Q2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
R3hdm1E9Q9Q2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms