Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Srp54bE9PXC0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.13■□□□□ 0.17
Srp54bE9PXC0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.13■□□□□ 0.17
Srp54bE9PXC0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
Srp54bE9PXC0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Srp54bE9PXC0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54bE9PXC0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Srp54bE9PXC0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Srp54bE9PXC0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54bE9PXC0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54bE9PXC0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54bE9PXC0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54bE9PXC0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54bE9PXC0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54bE9PXC0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54bE9PXC0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54bE9PXC0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54bE9PXC0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54bE9PXC0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54bE9PXC0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
Srp54bE9PXC0 Gm18195-201ENSMUST00000207604 706 ntBASIC16.12■□□□□ 0.17
Srp54bE9PXC0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.12■□□□□ 0.17
Srp54bE9PXC0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54bE9PXC0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.12■□□□□ 0.17
Srp54bE9PXC0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54bE9PXC0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54bE9PXC0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54bE9PXC0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54bE9PXC0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srp54bE9PXC0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.12■□□□□ 0.17
Srp54bE9PXC0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srp54bE9PXC0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srp54bE9PXC0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Srp54bE9PXC0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srp54bE9PXC0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.11■□□□□ 0.17
Srp54bE9PXC0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.11■□□□□ 0.17
Srp54bE9PXC0 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.11■□□□□ 0.17
Srp54bE9PXC0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Srp54bE9PXC0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.11■□□□□ 0.17
Srp54bE9PXC0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.11■□□□□ 0.17
Srp54bE9PXC0 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.11■□□□□ 0.17
Srp54bE9PXC0 Rps4l-201ENSMUST00000071745 943 ntBASIC16.11■□□□□ 0.17
Srp54bE9PXC0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Srp54bE9PXC0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srp54bE9PXC0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srp54bE9PXC0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Srp54bE9PXC0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Srp54bE9PXC0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srp54bE9PXC0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Srp54bE9PXC0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srp54bE9PXC0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srp54bE9PXC0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srp54bE9PXC0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srp54bE9PXC0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Srp54bE9PXC0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.11■□□□□ 0.17
Srp54bE9PXC0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srp54bE9PXC0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Srp54bE9PXC0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srp54bE9PXC0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Srp54bE9PXC0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srp54bE9PXC0 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.1■□□□□ 0.17
Srp54bE9PXC0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Srp54bE9PXC0 Gm6443-201ENSMUST00000203599 874 ntBASIC16.1■□□□□ 0.17
Srp54bE9PXC0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.1■□□□□ 0.17
Srp54bE9PXC0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Srp54bE9PXC0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.1■□□□□ 0.17
Srp54bE9PXC0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.1■□□□□ 0.17
Srp54bE9PXC0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srp54bE9PXC0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srp54bE9PXC0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srp54bE9PXC0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Srp54bE9PXC0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Srp54bE9PXC0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Srp54bE9PXC0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Srp54bE9PXC0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Srp54bE9PXC0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srp54bE9PXC0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srp54bE9PXC0 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.09■□□□□ 0.17
Srp54bE9PXC0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srp54bE9PXC0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Srp54bE9PXC0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Srp54bE9PXC0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.09■□□□□ 0.17
Srp54bE9PXC0 Gm18733-201ENSMUST00000173950 856 ntBASIC16.09■□□□□ 0.17
Srp54bE9PXC0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Srp54bE9PXC0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srp54bE9PXC0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Srp54bE9PXC0 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.09■□□□□ 0.17
Srp54bE9PXC0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srp54bE9PXC0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Srp54bE9PXC0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Srp54bE9PXC0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Srp54bE9PXC0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Srp54bE9PXC0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Srp54bE9PXC0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Srp54bE9PXC0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srp54bE9PXC0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Srp54bE9PXC0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.08■□□□□ 0.17
Srp54bE9PXC0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Srp54bE9PXC0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Srp54bE9PXC0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms