Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a3E9PWQ3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a3E9PWQ3 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.38■□□□□ 0.21
Col6a3E9PWQ3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a3E9PWQ3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a3E9PWQ3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a3E9PWQ3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Gm11425-201ENSMUST00000119608 498 ntBASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Gm20553-201ENSMUST00000204205 844 ntBASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Gm45331-201ENSMUST00000209868 554 ntBASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Gm9396-201ENSMUST00000076703 567 ntBASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Syt7-205ENSMUST00000224135 1557 ntBASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Gm7488-201ENSMUST00000117148 684 ntBASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Gm27989-201ENSMUST00000184721 107 ntBASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a3E9PWQ3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a3E9PWQ3 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Col6a3E9PWQ3 Gm6745-201ENSMUST00000199216 526 ntBASIC16.36■□□□□ 0.21
Col6a3E9PWQ3 Gm45167-201ENSMUST00000208007 322 ntBASIC16.36■□□□□ 0.21
Col6a3E9PWQ3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a3E9PWQ3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a3E9PWQ3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a3E9PWQ3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.36■□□□□ 0.21
Col6a3E9PWQ3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Col6a3E9PWQ3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.36■□□□□ 0.21
Col6a3E9PWQ3 Gm45384-201ENSMUST00000210451 277 ntBASIC16.36■□□□□ 0.21
Col6a3E9PWQ3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a3E9PWQ3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.36■□□□□ 0.21
Col6a3E9PWQ3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a3E9PWQ3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a3E9PWQ3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a3E9PWQ3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a3E9PWQ3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a3E9PWQ3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a3E9PWQ3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a3E9PWQ3 Mir1247-201ENSMUST00000116706 82 ntBASIC16.35■□□□□ 0.21
Col6a3E9PWQ3 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.35■□□□□ 0.21
Col6a3E9PWQ3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a3E9PWQ3 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a3E9PWQ3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a3E9PWQ3 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a3E9PWQ3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a3E9PWQ3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a3E9PWQ3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a3E9PWQ3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Col6a3E9PWQ3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a3E9PWQ3 Gm3786-201ENSMUST00000202659 378 ntBASIC16.35■□□□□ 0.21
Col6a3E9PWQ3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a3E9PWQ3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.35■□□□□ 0.21
Col6a3E9PWQ3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.35■□□□□ 0.21
Col6a3E9PWQ3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a3E9PWQ3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.35■□□□□ 0.21
Col6a3E9PWQ3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col6a3E9PWQ3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a3E9PWQ3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a3E9PWQ3 Gm9172-201ENSMUST00000212092 954 ntBASIC16.34■□□□□ 0.21
Col6a3E9PWQ3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a3E9PWQ3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a3E9PWQ3 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Col6a3E9PWQ3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a3E9PWQ3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a3E9PWQ3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a3E9PWQ3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a3E9PWQ3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Col6a3E9PWQ3 Gm17150-201ENSMUST00000165577 381 ntBASIC16.34■□□□□ 0.21
Col6a3E9PWQ3 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.34■□□□□ 0.21
Col6a3E9PWQ3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a3E9PWQ3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Col6a3E9PWQ3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a3E9PWQ3 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.34■□□□□ 0.21
Col6a3E9PWQ3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a3E9PWQ3 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a3E9PWQ3 Gm25406-201ENSMUST00000157599 105 ntBASIC16.34■□□□□ 0.21
Col6a3E9PWQ3 Gm28631-201ENSMUST00000190740 334 ntBASIC16.34■□□□□ 0.21
Col6a3E9PWQ3 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a3E9PWQ3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col6a3E9PWQ3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col6a3E9PWQ3 AC131068.2-201ENSMUST00000226175 1453 ntBASIC16.33■□□□□ 0.2
Col6a3E9PWQ3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.33■□□□□ 0.2
Col6a3E9PWQ3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms