Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd6A3KFM7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd6A3KFM7 Gm15427-201ENSMUST00000117288 531 ntBASIC13.28□□□□□ -0.28
Chd6A3KFM7 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.28□□□□□ -0.28
Chd6A3KFM7 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.28□□□□□ -0.28
Chd6A3KFM7 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chd6A3KFM7 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Chd6A3KFM7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd6A3KFM7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd6A3KFM7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Chd6A3KFM7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd6A3KFM7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.28□□□□□ -0.28
Chd6A3KFM7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd6A3KFM7 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.28□□□□□ -0.28
Chd6A3KFM7 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.28□□□□□ -0.28
Chd6A3KFM7 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chd6A3KFM7 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd6A3KFM7 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chd6A3KFM7 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chd6A3KFM7 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd6A3KFM7 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd6A3KFM7 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd6A3KFM7 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Chd6A3KFM7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd6A3KFM7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd6A3KFM7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Chd6A3KFM7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Chd6A3KFM7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.28□□□□□ -0.28
Chd6A3KFM7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd6A3KFM7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.28□□□□□ -0.28
Chd6A3KFM7 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Chd6A3KFM7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC13.27□□□□□ -0.28
Chd6A3KFM7 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Chd6A3KFM7 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.27□□□□□ -0.28
Chd6A3KFM7 Gm6266-201ENSMUST00000203844 806 ntBASIC13.27□□□□□ -0.28
Chd6A3KFM7 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chd6A3KFM7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chd6A3KFM7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13.27□□□□□ -0.28
Chd6A3KFM7 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Chd6A3KFM7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chd6A3KFM7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chd6A3KFM7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chd6A3KFM7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chd6A3KFM7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.27□□□□□ -0.29
Chd6A3KFM7 Gm11425-201ENSMUST00000119608 498 ntBASIC13.27□□□□□ -0.29
Chd6A3KFM7 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chd6A3KFM7 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.27□□□□□ -0.29
Chd6A3KFM7 Gm28631-201ENSMUST00000190740 334 ntBASIC13.27□□□□□ -0.29
Chd6A3KFM7 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Chd6A3KFM7 Gm9396-201ENSMUST00000076703 567 ntBASIC13.27□□□□□ -0.29
Chd6A3KFM7 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chd6A3KFM7 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.27□□□□□ -0.29
Chd6A3KFM7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC13.27□□□□□ -0.29
Chd6A3KFM7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Chd6A3KFM7 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.27□□□□□ -0.29
Chd6A3KFM7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chd6A3KFM7 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chd6A3KFM7 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chd6A3KFM7 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chd6A3KFM7 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd6A3KFM7 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Chd6A3KFM7 Gm27300-201ENSMUST00000184085 97 ntBASIC13.26□□□□□ -0.29
Chd6A3KFM7 Gm27335-201ENSMUST00000184758 97 ntBASIC13.26□□□□□ -0.29
Chd6A3KFM7 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chd6A3KFM7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chd6A3KFM7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chd6A3KFM7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd6A3KFM7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd6A3KFM7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd6A3KFM7 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd6A3KFM7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Chd6A3KFM7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chd6A3KFM7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd6A3KFM7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chd6A3KFM7 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd6A3KFM7 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.26□□□□□ -0.29
Chd6A3KFM7 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chd6A3KFM7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chd6A3KFM7 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.26□□□□□ -0.29
Chd6A3KFM7 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd6A3KFM7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd6A3KFM7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd6A3KFM7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd6A3KFM7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC13.26□□□□□ -0.29
Chd6A3KFM7 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd6A3KFM7 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chd6A3KFM7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd6A3KFM7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Chd6A3KFM7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.26□□□□□ -0.29
Chd6A3KFM7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd6A3KFM7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chd6A3KFM7 Gm13453-201ENSMUST00000118708 357 ntBASIC13.26□□□□□ -0.29
Chd6A3KFM7 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chd6A3KFM7 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.26□□□□□ -0.29
Chd6A3KFM7 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.26□□□□□ -0.29
Chd6A3KFM7 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.25□□□□□ -0.29
Chd6A3KFM7 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.25□□□□□ -0.29
Chd6A3KFM7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chd6A3KFM7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chd6A3KFM7 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms