Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Ccdc112A0AUP1 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc112A0AUP1 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ccdc112A0AUP1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc112A0AUP1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc112A0AUP1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc112A0AUP1 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.76■□□□□ 0.59
Ccdc112A0AUP1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.76■□□□□ 0.59
Ccdc112A0AUP1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc112A0AUP1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc112A0AUP1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc112A0AUP1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc112A0AUP1 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc112A0AUP1 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc112A0AUP1 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.76■□□□□ 0.59
Ccdc112A0AUP1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ccdc112A0AUP1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.76■□□□□ 0.59
Ccdc112A0AUP1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc112A0AUP1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
Ccdc112A0AUP1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc112A0AUP1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Ccdc112A0AUP1 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc112A0AUP1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc112A0AUP1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc112A0AUP1 Gm18115-201ENSMUST00000221209 621 ntBASIC18.75■□□□□ 0.59
Ccdc112A0AUP1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc112A0AUP1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Ccdc112A0AUP1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc112A0AUP1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc112A0AUP1 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc112A0AUP1 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc112A0AUP1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.75■□□□□ 0.59
Ccdc112A0AUP1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc112A0AUP1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc112A0AUP1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc112A0AUP1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.75■□□□□ 0.59
Ccdc112A0AUP1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc112A0AUP1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc112A0AUP1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc112A0AUP1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc112A0AUP1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc112A0AUP1 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc112A0AUP1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc112A0AUP1 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ccdc112A0AUP1 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc112A0AUP1 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc112A0AUP1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Ccdc112A0AUP1 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ccdc112A0AUP1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Ccdc112A0AUP1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc112A0AUP1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc112A0AUP1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
Ccdc112A0AUP1 Gm11539-201ENSMUST00000119837 557 ntBASIC18.74■□□□□ 0.59
Ccdc112A0AUP1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.74■□□□□ 0.59
Ccdc112A0AUP1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.74■□□□□ 0.59
Ccdc112A0AUP1 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.74■□□□□ 0.59
Ccdc112A0AUP1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc112A0AUP1 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.74■□□□□ 0.59
Ccdc112A0AUP1 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.74■□□□□ 0.59
Ccdc112A0AUP1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc112A0AUP1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc112A0AUP1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc112A0AUP1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc112A0AUP1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc112A0AUP1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.73■□□□□ 0.59
Ccdc112A0AUP1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc112A0AUP1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc112A0AUP1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Ccdc112A0AUP1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc112A0AUP1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc112A0AUP1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc112A0AUP1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.73■□□□□ 0.59
Ccdc112A0AUP1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.73■□□□□ 0.59
Ccdc112A0AUP1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc112A0AUP1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Ccdc112A0AUP1 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc112A0AUP1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ccdc112A0AUP1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccdc112A0AUP1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Ccdc112A0AUP1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ccdc112A0AUP1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ccdc112A0AUP1 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.72■□□□□ 0.59
Ccdc112A0AUP1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc112A0AUP1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc112A0AUP1 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc112A0AUP1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc112A0AUP1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc112A0AUP1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc112A0AUP1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc112A0AUP1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ccdc112A0AUP1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc112A0AUP1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.72■□□□□ 0.59
Ccdc112A0AUP1 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ccdc112A0AUP1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc112A0AUP1 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ccdc112A0AUP1 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc112A0AUP1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc112A0AUP1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccdc112A0AUP1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.72■□□□□ 0.59
Ccdc112A0AUP1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms