Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Sybu-209ENSMUST00000228639 4113 ntBASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Gm37856-201ENSMUST00000191634 999 ntBASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Igkv3-5A0A140T8M6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Gm11841-201ENSMUST00000117060 1963 ntBASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv3-5A0A140T8M6 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 Gm13216-201ENSMUST00000117145 591 ntBASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Igkv3-5A0A140T8M6 Haglr-201ENSMUST00000100000 2085 ntBASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms