Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10812-201ENSMUST00000099864 546 ntBASIC14.4□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm44450-201ENSMUST00000199528 114 ntBASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.37□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms