Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-4A0A0G2JG37 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-4A0A0G2JG37 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-4A0A0G2JG37 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-4A0A0G2JG37 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-4A0A0G2JG37 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-4A0A0G2JG37 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-4A0A0G2JG37 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-4A0A0G2JG37 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Trav9d-4A0A0G2JG37 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-4A0A0G2JG37 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9d-4A0A0G2JG37 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav9d-4A0A0G2JG37 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Gm6211-202ENSMUST00000167849 925 ntBASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Gm44549-201ENSMUST00000208351 577 ntBASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Gm45212-201ENSMUST00000205831 3403 ntBASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.28□□□□□ -0.6
Trav9d-4A0A0G2JG37 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav9d-4A0A0G2JG37 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav9d-4A0A0G2JG37 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav9d-4A0A0G2JG37 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav9d-4A0A0G2JG37 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav9d-4A0A0G2JG37 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav9d-4A0A0G2JG37 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC11.27□□□□□ -0.6
Trav9d-4A0A0G2JG37 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 Gm11643-201ENSMUST00000119578 864 ntBASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 Gm8495-201ENSMUST00000188740 694 ntBASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 Gm42555-201ENSMUST00000199304 1039 ntBASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav9d-4A0A0G2JG37 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav9d-4A0A0G2JG37 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms