Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gm3272-201ENSMUST00000181181 1229 ntBASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gm10566-201ENSMUST00000086739 996 ntBASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gm10819-201ENSMUST00000099988 561 ntBASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gm7284-201ENSMUST00000131667 944 ntBASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13n-1A0A0G2JEU8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms