Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Gm42555-201ENSMUST00000199304 1039 ntBASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
Trav3n-3A0A0G2JEM0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.46□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Gm11643-201ENSMUST00000119578 864 ntBASIC12.46□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.46□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav3n-3A0A0G2JEM0 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms