Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav11A0A0B4J1J9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav11A0A0B4J1J9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav11A0A0B4J1J9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav11A0A0B4J1J9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav11A0A0B4J1J9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav11A0A0B4J1J9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav11A0A0B4J1J9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav11A0A0B4J1J9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav11A0A0B4J1J9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav11A0A0B4J1J9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav11A0A0B4J1J9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav11A0A0B4J1J9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav11A0A0B4J1J9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav11A0A0B4J1J9 Dio3-201ENSMUST00000097228 1449 ntBASIC11.33□□□□□ -0.6
Trav11A0A0B4J1J9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav11A0A0B4J1J9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav11A0A0B4J1J9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav11A0A0B4J1J9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav11A0A0B4J1J9 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav11A0A0B4J1J9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav11A0A0B4J1J9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav11A0A0B4J1J9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav11A0A0B4J1J9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Trav11A0A0B4J1J9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Gm18284-201ENSMUST00000172604 624 ntBASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav11A0A0B4J1J9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Gm21596-201ENSMUST00000178049 1316 ntBASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav11A0A0B4J1J9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav11A0A0B4J1J9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav11A0A0B4J1J9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav11A0A0B4J1J9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms