Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.38□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC12.38□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.38□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Gm27801-201ENSMUST00000184174 223 ntBASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Spcs1-204ENSMUST00000226782 949 ntBASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Rubie-203ENSMUST00000227803 2430 ntBASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tcrg-V4A0A0B4J1J8 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms