Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.69■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv5-43A0A0B4J1J2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.69■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.69■□□□□ 0.26
Igkv5-43A0A0B4J1J2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.69■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.69■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.68■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm25406-201ENSMUST00000157599 105 ntBASIC16.68■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.68■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.67■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv5-43A0A0B4J1J2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv5-43A0A0B4J1J2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv5-43A0A0B4J1J2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm44357-201ENSMUST00000195897 142 ntBASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm19658-201ENSMUST00000196231 138 ntBASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm44367-201ENSMUST00000196836 138 ntBASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm44350-201ENSMUST00000197197 138 ntBASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm44390-201ENSMUST00000197533 144 ntBASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm44313-201ENSMUST00000198018 138 ntBASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm44486-201ENSMUST00000198508 138 ntBASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm44314-201ENSMUST00000199263 138 ntBASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm44394-201ENSMUST00000199558 138 ntBASIC16.65■□□□□ 0.26
Igkv5-43A0A0B4J1J2 Gm44484-201ENSMUST00000199873 138 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms