Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trdv1A0A075B657 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Il3ra-202ENSMUST00000223589 738 ntBASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.53□□□□□ -0.4
Trdv1A0A075B657 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trdv1A0A075B657 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trdv1A0A075B657 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trdv1A0A075B657 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trdv1A0A075B657 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trdv1A0A075B657 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trdv1A0A075B657 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trdv1A0A075B657 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trdv1A0A075B657 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trdv1A0A075B657 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trdv1A0A075B657 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trdv1A0A075B657 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trdv1A0A075B657 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.52□□□□□ -0.41
Trdv1A0A075B657 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trdv1A0A075B657 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.52□□□□□ -0.41
Trdv1A0A075B657 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.52□□□□□ -0.41
Trdv1A0A075B657 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trdv1A0A075B657 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Trdv1A0A075B657 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trdv1A0A075B657 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trdv1A0A075B657 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trdv1A0A075B657 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trdv1A0A075B657 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trdv1A0A075B657 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trdv1A0A075B657 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trdv1A0A075B657 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.52□□□□□ -0.41
Trdv1A0A075B657 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trdv1A0A075B657 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trdv1A0A075B657 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv1A0A075B657 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms