Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav5-4A0A075B652 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav5-4A0A075B652 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav5-4A0A075B652 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav5-4A0A075B652 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav5-4A0A075B652 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav5-4A0A075B652 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav5-4A0A075B652 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav5-4A0A075B652 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav5-4A0A075B652 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav5-4A0A075B652 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav5-4A0A075B652 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav5-4A0A075B652 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav5-4A0A075B652 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 Mir5122-201ENSMUST00000175004 89 ntBASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav5-4A0A075B652 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav5-4A0A075B652 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.72□□□□□ -0.21
Trav5-4A0A075B652 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav5-4A0A075B652 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav5-4A0A075B652 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav5-4A0A075B652 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav5-4A0A075B652 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav5-4A0A075B652 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav5-4A0A075B652 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav5-4A0A075B652 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.72□□□□□ -0.21
Trav5-4A0A075B652 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav5-4A0A075B652 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav5-4A0A075B652 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav5-4A0A075B652 Gm27463-201ENSMUST00000183569 57 ntBASIC13.72□□□□□ -0.21
Trav5-4A0A075B652 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav5-4A0A075B652 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav5-4A0A075B652 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav5-4A0A075B652 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav5-4A0A075B652 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav5-4A0A075B652 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trav5-4A0A075B652 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav5-4A0A075B652 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav5-4A0A075B652 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav5-4A0A075B652 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav5-4A0A075B652 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav5-4A0A075B652 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav5-4A0A075B652 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Trav5-4A0A075B652 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav5-4A0A075B652 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav5-4A0A075B652 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav5-4A0A075B652 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav5-4A0A075B652 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav5-4A0A075B652 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav5-4A0A075B652 Gm21814-202ENSMUST00000203277 873 ntBASIC13.71□□□□□ -0.21
Trav5-4A0A075B652 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav5-4A0A075B652 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Trav5-4A0A075B652 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.71□□□□□ -0.21
Trav5-4A0A075B652 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.71□□□□□ -0.21
Trav5-4A0A075B652 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav5-4A0A075B652 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav5-4A0A075B652 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav5-4A0A075B652 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
Trav5-4A0A075B652 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav5-4A0A075B652 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav5-4A0A075B652 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav5-4A0A075B652 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav5-4A0A075B652 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav5-4A0A075B652 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.71□□□□□ -0.22
Trav5-4A0A075B652 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trav5-4A0A075B652 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav5-4A0A075B652 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav5-4A0A075B652 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav5-4A0A075B652 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav5-4A0A075B652 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav5-4A0A075B652 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms