Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-4-dv10A0A075B651 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Gm12085-201ENSMUST00000119263 940 ntBASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Trmt13-210ENSMUST00000198454 880 ntBASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4-4-dv10A0A075B651 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Actl10-202ENSMUST00000226583 1501 ntBASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Gm12441-201ENSMUST00000121806 588 ntBASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4-4-dv10A0A075B651 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.78□□□□□ -0.36
Trav4-4-dv10A0A075B651 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.78□□□□□ -0.36
Trav4-4-dv10A0A075B651 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trav4-4-dv10A0A075B651 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-4-dv10A0A075B651 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-4-dv10A0A075B651 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-4-dv10A0A075B651 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-4-dv10A0A075B651 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4-4-dv10A0A075B651 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms