Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6-6A0A075B603 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 Gm18666-201ENSMUST00000190039 958 ntBASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6-6A0A075B603 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6-6A0A075B603 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6-6A0A075B603 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6-6A0A075B603 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
Trav6-6A0A075B603 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6-6A0A075B603 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6-6A0A075B603 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6-6A0A075B603 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6-6A0A075B603 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6-6A0A075B603 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6-6A0A075B603 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6-6A0A075B603 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Trav6-6A0A075B603 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav6-6A0A075B603 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-6A0A075B603 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav6-6A0A075B603 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.27□□□□□ -0.45
Trav6-6A0A075B603 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-6A0A075B603 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-6A0A075B603 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-6A0A075B603 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav6-6A0A075B603 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-6A0A075B603 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-6A0A075B603 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-6A0A075B603 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-6A0A075B603 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-6A0A075B603 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-6A0A075B603 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-6A0A075B603 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-6A0A075B603 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-6A0A075B603 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-6A0A075B603 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav6-6A0A075B603 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Trav6-6A0A075B603 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-6A0A075B603 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6-6A0A075B603 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6-6A0A075B603 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms