Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC021451.1-201ENST00000523498 1129 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 OR4C2P-201ENST00000530855 1064 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 EIF5A2P1-201ENST00000564027 460 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 AC074051.3-201ENST00000570238 358 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 MIR4666A-201ENST00000580160 79 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 CKS1BP3-201ENST00000600888 237 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 AC008638.3-201ENST00000603341 463 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 AL445435.1-201ENST00000604232 665 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 BRDTP1-201ENST00000605735 677 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 AC022960.3-201ENST00000619794 441 ntBASIC6.73□□□□□ -1.33
SHROOM4Q9ULL8 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 LINC02471-203ENST00000641941 4752 ntBASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 AC025125.1-201ENST00000624743 1922 ntBASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 DCAF13P3-201ENST00000561147 1334 ntBASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 LINC01355-201ENST00000566551 5444 ntBASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 AC073073.2-201ENST00000609827 2578 ntBASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 UBE2V1P2-201ENST00000397758 440 ntBASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 B3GNT2P1-201ENST00000434960 952 ntBASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 RN7SL504P-201ENST00000494496 287 ntBASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 AC109471.1-201ENST00000511631 612 ntBASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 AC023632.1-201ENST00000518463 375 ntBASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 CENPUP2-201ENST00000555897 1186 ntBASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 AC069431.2-201ENST00000604149 1099 ntBASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 AC024933.1-201ENST00000608472 348 ntBASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 AC084824.4-201ENST00000620106 731 ntBASIC6.72□□□□□ -1.33
SHROOM4Q9ULL8 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
SHROOM4Q9ULL8 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC6.71□□□□□ -1.33
SHROOM4Q9ULL8 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 RNU6-444P-201ENST00000383988 108 ntBASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 RNU6-224P-201ENST00000384055 107 ntBASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 MIR93-201ENST00000385024 80 ntBASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 AC093752.1-206ENST00000511823 336 ntBASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 AC006539.2-201ENST00000601729 572 ntBASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 AL163642.2-201ENST00000604722 1019 ntBASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 AP003117.2-201ENST00000606010 545 ntBASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 AC104763.3-201ENST00000613765 618 ntBASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 AC006386.2-201ENST00000624491 75 ntBASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 AC012005.1-201ENST00000624575 75 ntBASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 DBF4P1-201ENST00000412976 1892 ntBASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
SHROOM4Q9ULL8 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 AC027644.1-201ENST00000419595 298 ntBASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 AC010655.1-201ENST00000449336 292 ntBASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 HMGB3P22-202ENST00000451823 572 ntBASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 RPL21P103-201ENST00000479921 488 ntBASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 PDLIM1P4-201ENST00000504327 1006 ntBASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 RN7SKP277-201ENST00000516895 283 ntBASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 MIR4509-3-201ENST00000578671 94 ntBASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 MIR3945-201ENST00000581853 98 ntBASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 MIR4509-2-201ENST00000583920 94 ntBASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 MIR4509-1-201ENST00000618224 94 ntBASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 ZNF663P-202ENST00000641770 1131 ntBASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
SHROOM4Q9ULL8 SCN1A-220ENST00000641603 12506 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms