Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC104108.1-201ENST00000509930 412 ntBASIC4.03□□□□□ -1.76
CLIP2Q9UDT6 RN7SKP96-201ENST00000516948 297 ntBASIC4.03□□□□□ -1.76
CLIP2Q9UDT6 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.03□□□□□ -1.76
CLIP2Q9UDT6 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.03□□□□□ -1.76
CLIP2Q9UDT6 AC095057.3-201ENST00000567102 1157 ntBASIC4.03□□□□□ -1.76
CLIP2Q9UDT6 AC124283.4-201ENST00000581815 456 ntBASIC4.03□□□□□ -1.76
CLIP2Q9UDT6 AC067852.3-201ENST00000589177 561 ntBASIC4.03□□□□□ -1.76
CLIP2Q9UDT6 RPAP2P1-201ENST00000603626 1168 ntBASIC4.03□□□□□ -1.76
CLIP2Q9UDT6 AL450489.1-201ENST00000612071 468 ntBASIC4.03□□□□□ -1.76
CLIP2Q9UDT6 AL359535.1-201ENST00000612100 1087 ntBASIC4.03□□□□□ -1.76
CLIP2Q9UDT6 AL442067.2-201ENST00000614033 363 ntBASIC4.03□□□□□ -1.76
CLIP2Q9UDT6 VN1R9P-201ENST00000614184 867 ntBASIC4.03□□□□□ -1.76
CLIP2Q9UDT6 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.03□□□□□ -1.76
CLIP2Q9UDT6 AC253576.2-201ENST00000618815 580 ntBASIC4.03□□□□□ -1.76
CLIP2Q9UDT6 RNU6-156P-201ENST00000621869 107 ntBASIC4.03□□□□□ -1.76
CLIP2Q9UDT6 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLIP2Q9UDT6 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.03□□□□□ -1.76
CLIP2Q9UDT6 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 AC068647.1-201ENST00000489539 2265 ntBASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 SNORA31-201ENST00000362607 130 ntBASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 RNA5SP189-201ENST00000364920 115 ntBASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 SNORA9-201ENST00000384215 133 ntBASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 SNORA11C-201ENST00000408532 129 ntBASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 AC005326.1-201ENST00000429197 123 ntBASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 PSMA2P3-201ENST00000429685 675 ntBASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 RPS3AP12-201ENST00000443616 753 ntBASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 RN7SL601P-201ENST00000471221 293 ntBASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 RPS4XP22-201ENST00000480755 780 ntBASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 SNORA70.24-201ENST00000517233 118 ntBASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 AP001636.2-201ENST00000525517 696 ntBASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 OR5D17P-201ENST00000531492 978 ntBASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 AP003717.3-201ENST00000544832 1180 ntBASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 AC011492.1-201ENST00000600023 315 ntBASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 AC022149.2-201ENST00000621061 203 ntBASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 AP002371.2-201ENST00000624450 503 ntBASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLIP2Q9UDT6 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 EI24P2-201ENST00000397776 1076 ntBASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 RSL24D1P1-201ENST00000404972 493 ntBASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 AIMP1P1-201ENST00000418670 937 ntBASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 RPS15AP40-201ENST00000419621 391 ntBASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 RPF2P1-201ENST00000424137 906 ntBASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 RPL23AP83-201ENST00000434984 473 ntBASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 AC007967.1-201ENST00000455422 1159 ntBASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 RPS4XP2-201ENST00000458402 793 ntBASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 AC087312.1-201ENST00000471411 480 ntBASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 FCF1P8-201ENST00000510322 597 ntBASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 AC121161.1-201ENST00000510606 652 ntBASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 RPL7L1P13-201ENST00000511702 739 ntBASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 AC011458.1-201ENST00000604034 617 ntBASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 MFSD8-233ENST00000641482 4860 ntBASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 AC011978.2-201ENST00000569835 2054 ntBASIC4.01□□□□□ -1.77
CLIP2Q9UDT6 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4□□□□□ -1.77
CLIP2Q9UDT6 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CLIP2Q9UDT6 Y_RNA.110-201ENST00000363220 99 ntBASIC4□□□□□ -1.77
CLIP2Q9UDT6 MIR491-201ENST00000384877 84 ntBASIC4□□□□□ -1.77
CLIP2Q9UDT6 EIF5P1-201ENST00000400019 1231 ntBASIC4□□□□□ -1.77
CLIP2Q9UDT6 RN7SKP111-201ENST00000410349 271 ntBASIC4□□□□□ -1.77
CLIP2Q9UDT6 RNU2-72P-201ENST00000411175 163 ntBASIC4□□□□□ -1.77
CLIP2Q9UDT6 AL445183.3-201ENST00000414168 502 ntBASIC4□□□□□ -1.77
CLIP2Q9UDT6 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4□□□□□ -1.77
CLIP2Q9UDT6 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms