Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 AC099489.2-201ENST00000574976 260 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 AC126365.2-201ENST00000580630 379 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 YWHAQP7-201ENST00000603536 658 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 AC007566.2-201ENST00000603642 413 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 AC002487.1-201ENST00000604565 994 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 AC253576.2-201ENST00000618815 580 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 AP003476.1-201ENST00000623984 516 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
CLCF1Q9UBD9 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.92
CLCF1Q9UBD9 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.09□□□□□ -1.92
CLCF1Q9UBD9 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.09□□□□□ -1.92
CLCF1Q9UBD9 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AL645937.1-201ENST00000641739 1652 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 RNU6-761P-201ENST00000384148 107 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AC073264.1-201ENST00000411508 416 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AL024507.1-201ENST00000412741 274 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 RPS3AP9-201ENST00000417027 792 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 PTP4A1P5-201ENST00000420305 455 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AC233981.1-201ENST00000423224 461 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 SKP1P1-201ENST00000438081 489 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AC104978.1-201ENST00000449387 391 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AL049829.1-201ENST00000465411 156 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AC091860.1-201ENST00000505723 432 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 IGKV2-26-201ENST00000518305 343 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AP001207.1-201ENST00000524051 481 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 OR6C73P-201ENST00000546432 358 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AC011611.1-201ENST00000552179 197 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AC008507.2-201ENST00000588402 1176 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AC006116.7-201ENST00000590141 756 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 VN1R87P-201ENST00000596706 487 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AL031985.2-201ENST00000600955 480 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AC068620.3-201ENST00000602749 560 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AL020997.3-201ENST00000602843 359 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AC244205.2-202ENST00000635781 342 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 AC139713.2-210ENST00000641741 992 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 CEP170P1-201ENST00000502249 4587 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 MTCO1P24-201ENST00000515438 1558 ntBASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLCF1Q9UBD9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 MTND5P3-201ENST00000438536 1800 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 AC073346.2-201ENST00000624724 2058 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 RNU6-619P-201ENST00000365146 108 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 OR1L1-202ENST00000373686 1083 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 SFR1P1-201ENST00000403720 688 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 RSL24D1P1-201ENST00000404972 493 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 MIR1250-201ENST00000408098 113 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 AC092638.1-201ENST00000411966 1275 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 RPL31P2-201ENST00000413849 377 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 AC092832.1-201ENST00000422934 400 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 AC005326.1-201ENST00000429197 123 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 MTCYBP15-201ENST00000433123 1127 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 CKS1BP5-201ENST00000434172 273 ntBASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.07□□□□□ -1.92
CLCF1Q9UBD9 ARF4P4-201ENST00000439608 520 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms