Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 AC022069.1-201ENST00000582910 658 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 AC093227.2-201ENST00000589357 285 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 RNU1-30P-201ENST00000606575 163 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 AL390240.1-201ENST00000612950 384 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 CR381572.1-201ENST00000625098 102 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 SRP72P2-201ENST00000344851 1979 ntBASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CCNB1IP1Q9NPC3 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 AC004972.1-201ENST00000623934 2209 ntBASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 AC004925.1-201ENST00000624256 2706 ntBASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 MTND4P21-201ENST00000453886 1357 ntBASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 SNORD3H-201ENST00000384486 214 ntBASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 RPL7P60-201ENST00000397636 735 ntBASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 UBE2V1P15-201ENST00000407776 448 ntBASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 AC006960.1-201ENST00000419980 153 ntBASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 AL009174.1-201ENST00000426577 416 ntBASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 RPP40P1-201ENST00000426762 456 ntBASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 AC007389.2-201ENST00000434630 306 ntBASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 AC092170.1-201ENST00000440211 356 ntBASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 AC097262.1-201ENST00000452559 548 ntBASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 RPL7P15-201ENST00000461190 712 ntBASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 ACTR3P3-201ENST00000480448 893 ntBASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 MTCO1P49-201ENST00000523429 802 ntBASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 UBE2NP1-201ENST00000545592 458 ntBASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 AL109653.1-201ENST00000603091 248 ntBASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 AC010591.1-201ENST00000603941 649 ntBASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 AP004247.3-201ENST00000608682 624 ntBASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 AC008432.1-201ENST00000615912 1320 ntBASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCNB1IP1Q9NPC3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.15□□□□□ -1.9
CCNB1IP1Q9NPC3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.15□□□□□ -1.9
CCNB1IP1Q9NPC3 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.15□□□□□ -1.9
CCNB1IP1Q9NPC3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
CCNB1IP1Q9NPC3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
CCNB1IP1Q9NPC3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.15□□□□□ -1.9
CCNB1IP1Q9NPC3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 DEFB109C-201ENST00000382575 264 ntBASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 DEFB109B-201ENST00000382656 264 ntBASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 U8.11-201ENST00000384699 133 ntBASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 U8.12-201ENST00000384701 133 ntBASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 AC007066.1-201ENST00000392902 381 ntBASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 RNA5SP129-201ENST00000410276 118 ntBASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 RNU4-78P-201ENST00000410940 126 ntBASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 RN7SKP53-201ENST00000411337 315 ntBASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 AC009237.2-201ENST00000421358 284 ntBASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 AL445584.1-201ENST00000431451 330 ntBASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 HMGB3P11-201ENST00000440127 604 ntBASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 AL929288.2-201ENST00000446368 407 ntBASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 HMGN3P1-201ENST00000453847 193 ntBASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 U8.18-201ENST00000459285 133 ntBASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 MTND4LP22-201ENST00000508209 276 ntBASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 RNA5SP217-201ENST00000515959 91 ntBASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 RNU1-45P-201ENST00000517191 141 ntBASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 RANP9-201ENST00000519957 271 ntBASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 AC013468.1-201ENST00000608680 598 ntBASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 AL356863.1-201ENST00000623378 1080 ntBASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCNB1IP1Q9NPC3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms