Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 Y_RNA.159-201ENST00000363674 87 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 RNU6-1090P-201ENST00000364065 94 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 RNU6-1078P-201ENST00000364522 103 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 Y_RNA.453-201ENST00000384223 109 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 DBIP1-201ENST00000401435 260 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 RPL7L1P9-201ENST00000431298 745 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 CNOT7P2-201ENST00000441051 832 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 AC019185.1-201ENST00000442718 389 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 AC009963.2-201ENST00000453431 138 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 UBDP1-202ENST00000457888 382 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 RPL31P58-201ENST00000469001 379 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 FTH1P21-201ENST00000512179 511 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 RNU6-798P-201ENST00000516912 103 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 RNU6-1220P-201ENST00000517126 108 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 BNIP3P1-201ENST00000547295 580 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 OR4T1P-201ENST00000554933 911 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 BGLT3-201ENST00000564523 994 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 AC005341.1-201ENST00000571086 708 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 AC012507.3-201ENST00000603556 477 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 AC007363.1-201ENST00000604736 620 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 AC008277.2-201ENST00000605196 797 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 AC007038.2-201ENST00000608095 740 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 AC104458.1-201ENST00000608243 463 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 AC017083.3-201ENST00000609955 700 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 BX005214.3-202ENST00000619809 325 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 BTBD10P1-201ENST00000549824 1352 ntBASIC5.29□□□□□ -1.56
TRIM55Q9BYV6 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 RNU6-1085P-201ENST00000363576 107 ntBASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 RNU6-169P-201ENST00000365336 107 ntBASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 RNU11-4P-201ENST00000391149 133 ntBASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 HMGB3P20-201ENST00000417997 600 ntBASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 RPS27P18-201ENST00000431701 247 ntBASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 RPL21P89-201ENST00000444021 467 ntBASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 WASF1P1-201ENST00000447560 1131 ntBASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 RN7SL172P-201ENST00000460535 303 ntBASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 AC079382.1-201ENST00000493346 557 ntBASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 RN7SL808P-201ENST00000496066 299 ntBASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 PRDX4P1-201ENST00000507189 574 ntBASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 Y_RNA.704-201ENST00000516851 102 ntBASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 AP003034.1-201ENST00000534621 422 ntBASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 AL157687.1-201ENST00000554853 619 ntBASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 RPL12P25-202ENST00000598100 674 ntBASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 AL136363.1-201ENST00000605349 337 ntBASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 AL445222.1-201ENST00000607259 628 ntBASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 AC245517.5-201ENST00000611529 162 ntBASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 U6.42-201ENST00000618440 107 ntBASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 AC009704.2-201ENST00000618739 483 ntBASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 AC139792.3-201ENST00000623525 224 ntBASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM55Q9BYV6 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms