Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
CCDC28BQ9BUN5 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
CCDC28BQ9BUN5 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
CCDC28BQ9BUN5 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.53□□□□□ -1.85
CCDC28BQ9BUN5 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 TAS2R15P-201ENST00000390674 928 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AC119751.3-201ENST00000399720 670 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 GSTA8P-201ENST00000404253 637 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AC068533.1-201ENST00000418542 415 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 PAICSP7-201ENST00000419829 962 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AC009480.2-201ENST00000422916 432 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AC012498.1-201ENST00000424037 437 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 NEK4P1-201ENST00000433383 879 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AC009969.1-201ENST00000438726 172 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AC233982.1-201ENST00000451247 436 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AC010618.1-201ENST00000469924 477 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AC114322.1-201ENST00000506771 926 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AC023141.12-201ENST00000512399 199 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AC112673.1-201ENST00000513168 575 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 FABP5P12-201ENST00000515543 389 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AP004242.1-201ENST00000533701 349 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 LRRC34P1-201ENST00000542742 915 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AC023813.2-201ENST00000564321 469 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AL392112.1-201ENST00000605115 829 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AC069545.1-201ENST00000605671 358 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 MIR6867-201ENST00000610636 67 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AC024257.5-201ENST00000612739 531 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AC105227.2-201ENST00000615075 605 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AC079395.3-201ENST00000615161 484 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AC009464.1-201ENST00000615731 469 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AC009159.2-201ENST00000617603 606 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AC013470.4-201ENST00000619978 986 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AP005901.5-201ENST00000545779 1796 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AC007496.3-201ENST00000624987 3443 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 AC021755.1-201ENST00000559747 1447 ntBASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC28BQ9BUN5 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 NACA3P-201ENST00000359690 648 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 RNU6-1242P-201ENST00000391052 103 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 RPL21P65-201ENST00000406094 466 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 SNORA3.3-201ENST00000408712 125 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 SDCBPP2-201ENST00000424643 885 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 SETP5-201ENST00000437270 562 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 USP9YP22-201ENST00000438971 294 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 AC010655.1-201ENST00000449336 292 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 AC079776.3-201ENST00000450665 370 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 RPS20P32-201ENST00000456044 356 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 UBDP1-202ENST00000457888 382 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 AC096992.1-201ENST00000459808 709 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 RPS29P22-201ENST00000472363 168 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 AC007686.1-201ENST00000488511 463 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 SCARNA14-201ENST00000516903 136 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 RNA5SP135-201ENST00000517019 125 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 AF279873.1-201ENST00000523393 313 ntBASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC28BQ9BUN5 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms